 |
Job Description | P76340 | Confidence | 24.28% | Date | Thu Jan 5 12:21:57 GMT 2012 |
Rank | 337 | Aligned Residues | 48 |
% Identity | 19% | Template | c3clhA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:3-dehydroquinate synthase; |
PDBTitle: crystal structure of 3-dehydroquinate synthase (dhqs)from2 helicobacter pylori
|
Resolution | 2.40 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
Query Sequence |   |
K | I | L | L | I | E | D | N | Q | R | T | Q | . |
. |
. |
E | W | V | T | Q | G | L | S | E | A | G | Y | V | I | D | A | V | S | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | D | G | L | Y | L | A | L | K | D | D | Y | . |
. |
. |
A | L | I | I |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   | . | . | . |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |
|
|
|   |   |   |   |   |   |   |   | . | . | . |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
K | A | L | I | I | S | D | S | I | V | A | G | L | H | L | P | Y | L | L | E | R | L | K | A | L | E | V | R | V | C | V | I | E | S | G | E | K | Y | K | N | F | H | S | L | E | R | I | L | N | N | A | F | E | M | Q | L | N | R | H | S | L | M | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  | T | T |  |  |
| S |
|  |  |  |  |  |  |
| S | S | G | G | G |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|