Job Description P76340 Confidence 99.87% Date Thu Jan 5 12:21:57 GMT 2012 Rank 10 Aligned Residues 197 % Identity 20% Template c3c3wB_ PDB info PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																																											.
Query SS confidence																											.	.																																											.
Query Sequence		M	K	I	L	L	I	E	D	N	Q	R	T	Q	E	W	V	T	Q	G	L	S	E	A	G	Y	.	.	V	I	D	A	V	S	D	G	R	D	G	L	Y	L	A	L	K	D	D	Y	A	L	I	I	L	D	I	M	L	P	G	M	D	G	W	Q	I	L	Q	T	L	R	.	T	A	K	Q	T	P	V	I	C	L
Query Conservation																											.	.																																											.
Alig confidence																											.	.																																											.
Template Conservation
Template Sequence		V	K	V	F	L	V	D	D	H	E	V	V	R	R	G	L	V	D	L	L	G	A	D	P	E	L	D	V	V	G	E	A	G	S	V	A	E	A	M	A	R	V	P	A	A	R	P	D	V	A	V	L	D	V	R	L	P	D	G	N	G	I	E	L	C	R	D	L	L	S	R	M	P	D	L	R	C	L	I	L
Template Known Secondary structure									S														T		T	T								S	S														S						S			T	T														S	T	T						G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	R	D	S	V	D	D	R	V	R	G	L	D	S	G	A	N	D	Y	L	V	K	P	F	S	F	S	E	L	L	A	R	V	R	A	Q	L	R	Q	H	H	A	L	N	S	T	L	E	I	S	G	L	R	M	D	S	V	S	H	S	V	S	R	D	N	I	S	I	T	L	T	R	K	E	F	Q	L	L	W
Query Conservation
Alig confidence																																																						.	.
Template Conservation																																																						.	.
Template Sequence		T	S	Y	T	S	D	E	A	M	L	D	A	I	L	A	G	A	S	G	Y	V	V	K	D	I	K	G	M	E	L	A	R	A	V	K	D	V	G	A	G	R	S	L	L	D	N	R	A	A	A	A	L	.	.	M	A	K	L	R	G	A	A	E	K	Q	D	P	L	S	G	L	T	D	Q	E	R	T	L	L	G
Template Known Secondary structure		G	G	S	S	S											T																									G	G	G	S									.	.											S		T	T	T	T	S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	S	R	A	G	E	I	I	P	R	T	V	I	A	S	E	I	W	G	I	N	F	D	S	D	T	N	T	V	D	V	A	I	R	R	L	R	A	K	V	D	D	P	F	P	E	K	L	I
Query Conservation
Alig confidence								.	.	.	.										.	.	.	.	.
Template Conservation								.	.	.	.										.	.	.	.	.
Template Sequence		L	L	S	E	G	L	.	.	.	.	T	N	K	Q	I	A	D	R	M	.	.	.	.	.	F	L	A	E	K	T	V	K	N	Y	V	S	R	L	L	A	K	L	G	M	E	R	R	T	Q	A	A
Template Known Secondary structure				T	T	T		.	.	.	.										.	.	.	.	.	T																	T	T			S	S
Template Predicted Secondary structure								.	.	.	.										.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.					.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions