Job Description P76340 Confidence 20.36% Date Thu Jan 5 12:21:57 GMT 2012 Rank 360 Aligned Residues 48 % Identity 29% Template c3by6C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:predicted transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni Resolution 2.20 Å

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		162	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		R	A	G	E	I	I	.	P	R	T	V	I	A	S	E	I	W	G	I	N	F	D	S	D	T	N	T	V	D	V	A	I	R	R	L	R	A	K	V	D	D	P	F	P	E	K	L	I	A	T	I	R	G	M	G	Y	S	F	V	A	V
Query Conservation								.
Alig confidence								.										.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		S	A	N	D	Q	L	P	S	V	R	E	T	A	L	Q	E	.	.	.	.	.	K	I	N	P	N	T	V	A	K	A	Y	K	E	L	E	A	Q	K	.	.	.	.	.	.	.	V	I	R	T	I	P	G	K	G	T	F	I	T	G	N
Template Known Secondary structure			T	T		B												.	.	.	.	.	T																T	T	.	.	.	.	.	.	.	S					T	T	T						S
Template Predicted Secondary structure																		.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions