Job Description P76340 Confidence 97.14% Date Thu Jan 5 12:21:57 GMT 2012 Rank 134 Aligned Residues 78 % Identity 19% Template c2vycA_ PDB info PDB header:lyase Chain: A: PDB Molecule:biodegradative arginine decarboxylase; PDBTitle: crystal structure of acid induced arginine decarboxylase2 from e. coli Resolution 2.4 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.									.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.																															.																.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.																															.																.	.	.	.	.
Query Sequence		M	K	I	L	L	I	E	D	N	Q	R	T	Q	.	.	.	.	.	.	.	.	E	W	V	T	Q	G	L	S	E	A	G	Y	V	I	D	A	V	S	D	G	R	D	G	L	Y	L	A	L	K	D	.	D	Y	A	L	I	I	L	D	I	M	L	P	G	M	D	.	.	.	.	.	G	W	Q	I	L	Q	T	L
Query Conservation															.	.	.	.	.	.	.	.																															.																.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																															.																.	.	.	.	.
Template Conservation
Template Sequence		M	K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L	H
Template Known Secondary structure										T	T	S	T	T	S																	T	T							S	S									T	T	T				S										S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		67	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	A	K	Q	T	P	V	I	C	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	Q	Q	N	V	P	V	F	L	L	G
Template Known Secondary structure				S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions