Job Description P76340 Confidence 23.63% Date Thu Jan 5 12:21:57 GMT 2012 Rank 342 Aligned Residues 98 % Identity 10% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		K	I	L	L	I	E	D	N	Q	R	T	Q	E	W	V	T	Q	G	L	S	E	A	G	Y	V	I	D	A	V	S	D	G	R	D	G	L	Y	L	A	L	K	D	D	Y	A	L	I	I	L	D	I	M	L	P	G	M	D	G	.	W	Q	I	L	Q	T	L	R	T	A	K	Q	T	P	V	I	C	L	T	A	R
Query Conservation																																																												.
Alig confidence																																								.	.	.										.	.							.
Template Conservation																																								.	.	.										.	.
Template Sequence		N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E	F	E	V	A	S	D	R	E	V	S	V	.	.	.	K	G	F	D	T	V	I	V	D	.	.	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	K	P	G	V	I	V	Y	V	S	C	N
Template Known Secondary structure								S															T	T										T	T	T				.	.	.	T	T		S						.	.			T	T		S														S							S
Template Predicted Secondary structure																																								.	.	.										.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	V	D	D	R	V	R	G	L	D	S	G	A	N	D	Y	L	V	K	P	F	S	F	S	E	L	L
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		P	E	T	F	A	R	D	V	K	M	L	.	.	.	.	D	Y	R	I	D	E	I	V	A	L	D	M	F
Template Known Secondary structure												T	.	.	.	.	T												S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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