Return to main results Retrieve Phyre Job Id

Job DescriptionP76340
Confidence99.81%DateThu Jan 5 12:21:57 GMT 2012
Rank30Aligned Residues118
% Identity30%Templatec2qzjC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile
Resolution2.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  KILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARD
Query Conservation 







      
   
   
  
  
    


        



 
       
              

      
Alig confidence 















































































Template Conservation 






       
   
   
  
  
    


        
 

 
  
    
       
     


  
   
Template Sequence  KILIIDGDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYXTYIN
Template Known Secondary structure 
S
TT

ST


S
STT

S
S

Template Predicted Secondary structure 

































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........
Predicted Secondary structure 

























Query SS confidence 





































Query Sequence  SVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHH
Query Conservation                    
                   
Alig confidence 





































Template Conservation             
    
 

     
   
   
 
  
Template Sequence  EDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRRXN
Template Known Secondary structure 
TT
SSS

T
Template Predicted Secondary structure 









Template SS confidence 





































   86...90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions