Return to main results Retrieve Phyre Job Id

Job DescriptionP76340
Confidence70.55%DateThu Jan 5 12:21:57 GMT 2012
Rank193Aligned Residues40
% Identity13%Templatec2o8xA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:probable rna polymerase sigma-c factor; PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.........200.
Predicted Secondary structure 














Query SS confidence 












































Query Sequence  WLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDD
Query Conservation    
        

  
   
          

   
 


 

  
Alig confidence 



















.....



















Template Conservation   
  
      
  


   .....
 
  

   
 


  


Template Sequence  EALLLTQLLGLSYADAAAVC. . . . . GCPVGTIRSRVARARDALLA
Template Known Secondary structure  TS


.....TS

Template Predicted Secondary structure 


.....




Template SS confidence 












































   137..140.........150...... ...160.........170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions