Job Description P76340 Confidence 55.76% Date Thu Jan 5 12:21:57 GMT 2012 Rank 233 Aligned Residues 52 % Identity 19% Template c2l4aA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	D	N	I	S	I	T	L	T	R	K	E	F	Q	L	L	W	L	L	A	S	R	A	G	E	I	I	P	R	T	V	I	A	S	E	I	W	G	I	N	F	D	S	D	T	N	T	V	D	V	A	I	R	R	L	R	A	K
Query Conservation
Alig confidence																												.	.										.	.	.	.	.
Template Conservation																												.	.										.	.	.	.	.
Template Sequence		S	K	K	R	P	G	K	D	L	D	R	I	D	R	N	I	L	N	E	L	Q	K	D	G	R	I	.	.	S	N	V	E	L	S	K	R	V	.	.	.	.	.	G	L	S	P	T	P	C	L	E	R	V	R	R	L	E	R	Q
Template Known Secondary structure					S	S	G	G	G																T	T		.	.		S						T	T	.	.	.	.	.	T	S															T
Template Predicted Secondary structure																												.	.										.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions