|   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | N | S | T | L | E | I | S | G | L | R | M | D | S | V | S | H | S | V | S | R | D | N | I | S | I | T | L | T | R | K | E | F | Q | L | L | W | L | L | A | S | R | A | G | E | I | I | P | R | T | V | I | A | S | E | I | W | G | I | N | F | D | S | D | T | N | T | V | D | V | A | I | R | R | L | R | A | K | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
Template Sequence |   |
M | A | A | T | V | C | T | I | A | D | M | T | V | D | M | V | R | R | T | V | I | R | S | G | K | K | I | H | L | T | G | K | E | Y | V | L | L | E | L | L | L | Q | R | T | G | E | V | L | P | R | S | L | I | S | S | L | V | W | N | M | N | F | D | S | D | T | N | V | I | D | V | A | V | R | R | L | R | S | K | I |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  | T | T |  |  |  |
| T | T | T |
|
|  |  |  | T | T |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
| B |
|  |  |  |  |  |  |  |  | T |
|
|
| S | S |
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | P | F | P | E | K | L | I | A | T | I | R | G | M | G | Y | S | F | V | A | V | K | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|   |   |   |   |
|
Template Sequence |   |
D | D | D | F | E | P | K | L | I | H | T | V | R | G | A | G | Y | V | L | E | I | R | E | E |
Template Known Secondary structure |   |
T | T | T | S | S |
|
|
|  |  |
|
| T | T | T |
| B |  |  |
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |