Job Description P76340 Confidence 21.44% Date Thu Jan 5 12:21:57 GMT 2012 Rank 354 Aligned Residues 89 % Identity 15% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.							.
Query SS confidence																							.	.	.	.	.							.
Query Sequence		K	I	L	L	I	E	D	N	Q	R	T	Q	E	W	V	T	Q	G	L	S	E	.	.	.	.	.	A	G	Y	V	I	D	.	A	V	S	D	G	R	D	G	L	Y	L	A	L	K	D	D	Y	A	L	I	I	L	D	I	M	L	P	G	M	D	G	W	Q	I	L	Q	T	L	R	T	A	K	Q	T	P	V	I
Query Conservation																							.	.	.	.	.							.
Alig confidence																							.	.	.	.	.							.												.
Template Conservation																																														.
Template Sequence		N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	.	V	T	N	T	Y	D	V	I	I	V	D	S	S	D	N	Q	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q
Template Known Secondary structure								S																	G	G	G	G	S	T	T						S								T	.			S
Template Predicted Secondary structure																																														.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	T	A	R	D	S	V	D	D	R	V	R	G	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	E	S	L	W	I	H	V	G	T	I	K	N	M	I	G
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions