Job Description P12008 Confidence 100.00% Date Thu Jan 5 11:33:05 GMT 2012 Rank 5 Aligned Residues 280 % Identity 45% Template d1sq1a_ SCOP info Chorismate synthase, AroC Chorismate synthase, AroC Chorismate synthase, AroC Resolution 2.80

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	I	G	Q	L	F	R	V	T	T	F	G	E	S	H	G	L	A	L	G	C	I	V	D	G	V	P	P	G	I	P	L	T	E	A	D	L	Q	H	D	L	D	R	R	R	P	G	T	S	R	Y	T	T	Q	R	R	E	P	D	Q	V	K	I	L	S	G	V	F	E	G	V	T	T	G	T	S	I	G	L
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	F	G	T	R	L	K	F	T	S	F	G	E	S	H	G	V	A	V	G	C	I	I	D	G	X	P	A	G	V	K	F	D	E	E	F	L	Q	N	E	L	D	K	R	K	G	.	.	.	.	.	.	.	.	.	.	.	.	D	K	A	Q	V	L	S	G	V	F	E	G	Y	T	T	G	H	P	I	A	I
Template Known Secondary structure						S	S	S								G	G	G	S											S	S		B													T	T		.	.	.	.	.	.	.	.	.	.	.	.							S	S			T	T				S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.													.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	N	T	D	Q	R	S	Q	D	Y	S	A	I	K	D	V	F	R	P	G	H	A	D	Y	T	Y	E	Q	K	Y	G	L	R	D	Y	R	G	G	G	R	S	S	A	R	E	T	A	M	R	V	A	A	G	A	I	A	K	K	Y	L	A	E	K	F	G	I	E	I	R	G	C	L	T	Q	M	G	D	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	A	R	E	S	V	A	R	V	A	G	G	A	V	A	A	X	L	L	R	E	.	F	D	I	C	V	Q	S	G	V	F	G	V	G	T	F
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T																	T	.	T	T											T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		81	.																																									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
						164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	P	L	D	I	K	D	W	S	Q	V	E	Q	N	P	F	F	C	P	D	P	D	K	I	D	A	L	D	E	L	M	R	A	L	K	K	E	G	D	S	I	G	A	K	V	T	V	V	A	S	G	V	P	A	G	L	G	E	P	V	F	D	R	L	D	A	D	I	A	H	A	L	M	S	I	N	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		V	S	N	L	K	E	E	E	F	D	F	E	F	A	K	K	S	E	I	F	C	L	D	P	K	L	E	S	D	F	K	N	E	I	L	N	A	R	N	S	K	D	S	V	G	A	A	V	F	T	K	V	S	G	X	L	I	G	L	G	E	V	L	Y	D	K	L	D	S	K	L	A	H	A	L	X	G	I	N	A
Template Known Secondary structure					S		G	G	G	S								S	T	T		B	S		T	T	T														T	T													S			B	S		S	B	T	T	T	B												T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	G	V	E	I	G	D	G	F	D	V	V	A	L	R	G	S	Q	N	R	D	E	I	T	K	D	G	F	Q	S	N	H	A	G	G	I	L	G	G	I	S	S	G	Q	Q	I	I	A	H	M	A	L	K	P	T	S	S	I	T	V	P	G	R	T	I	N	R	F	G	E	E	V	E	M	I	T	K	G	R
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	A	V	E	I	G	E	G	I	N	A	S	K	X	R	G	S	C	N	N	D	A	L	K	D	G	K	F	L	S	N	H	S	G	G	I	L	G	G	I	S	N	G	E	N	L	I	L	K	T	Y	F	K	P	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R
Template Known Secondary structure								T	T	G	G	G	G	G	G	S										S	S	S	S		S			T	T		S			T	T			B	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.																						.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	P	C	V	G	I	R	A	V	P	I	A	E	A	M	L	A	I	V	L	M	D	H	L	L	R	Q	R	A	Q	N	A	D	V	K	T	D	I	P	R
Query Conservation
Alig confidence																														.	.					.
Template Conservation																														.	.					.
Template Sequence		H	D	P	C	V	G	V	R	G	S	V	V	A	S	A	X	V	R	L	V	L	A	D	C	L	L	L	N	.	.	A	S	A	N	.	L	N	N	L	K	N
Template Known Secondary structure		S		S		T																							T	.	.	G	G	G	S	.
Template Predicted Secondary structure																														.	.					.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.		.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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