Job Description P12008 Confidence 100.00% Date Thu Jan 5 11:33:05 GMT 2012 Rank 2 Aligned Residues 348 % Identity 38% Template d1qxoa_ SCOP info Chorismate synthase, AroC Chorismate synthase, AroC Chorismate synthase, AroC Resolution 2.00

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	V	T	T	F	G	E	S	H	G	L	A	L	G	C	I	V	D	G	V	P	P	G	I	P	L	T	E	A	D	L	Q	H	D	L	D	R	R	R	P	G	T	S	R	Y	T	T	Q	R	R	E	P	D	Q	V	K	I	L	S	G	V	F	E	G	V	T	T	G	T	S	I	G	L	L	I	E	N	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	R	Y	L	T	A	G	E	S	H	G	P	R	L	T	A	I	I	E	G	I	P	A	G	L	P	L	T	A	E	D	I	N	E	D	L	R	R	R	Q	G	G	Y	G	R	G	G	R	X	K	I	E	N	D	Q	V	V	F	T	S	G	V	R	H	G	K	T	T	G	A	P	I	T	X	D	V	I	N	K	D
Template Known Secondary structure										T	T	S	S											B	T		B																S	T	T			T														S			T	T				S	S									G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		90	.	.	.	.														.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		Q	R	S	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	A	I	K	D	V	F	R	P	G	H	A	D	Y	T	Y	E	Q	K	Y	G	L	R	D	Y	R	G	G	.	G	R	S	S	A	R	E	T	A	M	R	V	A	A	G	A	I	A	K	K	Y	L	A	E	K	F	G	I	E	I	R	G
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																														.																									.
Template Conservation																																																																										.
Template Sequence		H	Q	K	W	L	D	I	X	S	A	E	D	I	E	D	R	L	K	S	K	R	K	I	T	H	P	R	P	G	H	A	D	L	V	G	G	I	K	Y	R	F	D	D	L	R	N	S	L	E	R	S	S	A	R	E	T	T	X	R	V	A	V	G	A	V	A	K	R	L	L	A	E	.	L	D	X	E	I	A	N
Template Known Secondary structure		G	G	G	G	T	T	T	T		S	S				G	G	G	T	T	T	T				S			T	T	S	S									T		S	S	T								S	G	G	G																		.	T	T
Template Predicted Secondary structure																																																																										.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																																																										.	.
Query SS confidence													.	.	.	.	.	.	.																																																										.	.
Query Sequence		C	L	T	Q	M	G	D	I	P	L	D	.	.	.	.	.	.	.	I	K	D	W	S	Q	V	E	Q	N	P	F	F	C	P	D	P	D	K	I	D	A	L	D	E	L	M	R	A	L	K	K	E	G	D	S	I	G	A	K	V	T	V	V	A	S	G	V	P	A	G	L	G	E	P	V	F	.	.	D	R	L
Query Conservation													.	.	.	.	.	.	.																																																										.	.
Alig confidence													.	.	.	.	.	.	.																																																										.	.
Template Conservation
Template Sequence		H	V	V	V	F	G	G	K	E	I	D	V	P	E	N	L	T	V	A	E	I	K	Q	R	A	A	Q	S	E	V	S	I	V	N	Q	E	R	E	Q	E	I	K	D	Y	I	D	Q	I	K	R	D	G	D	T	I	G	G	V	V	E	T	V	V	G	G	V	P	V	G	L	G	S	Y	V	Q	W	D	R	K	L
Template Known Secondary structure							T	T							S	S												T	S	T	T			S		G	G	G														T	T													S			T	T		S		S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		D	A	D	I	A	H	A	L	M	S	I	N	A	V	K	G	V	E	I	G	D	G	F	D	V	V	A	L	R	G	S	Q	N	R	D	E	I	T	K	D	G	.	.	.	.	.	F	Q	S	N	H	A	G	G	I	L	G	G	I	S	S	G	Q	Q	I	I	A	H	M	A	L	K	P	T	S	S	I	T	V	P
Query Conservation																																											.	.	.	.	.
Alig confidence																																											.	.	.	.	.
Template Conservation
Template Sequence		D	A	R	L	A	Q	A	V	V	S	I	N	A	F	K	G	V	E	F	G	L	G	F	E	A	G	Y	R	K	G	S	Q	V	X	D	E	I	L	W	S	K	E	D	G	Y	T	R	R	T	N	N	L	G	G	F	E	G	G	X	T	N	G	Q	P	I	V	V	R	G	V	X	K	P	I	P	T	L	Y	K	P
Template Known Secondary structure											T	S	T	T							T	T	G	G	G	G	G	G	S		G	G	G	T	S							T	T	T					S			T	T	T	T			T	T				S	S												S			S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	T	I	N	R	F	G	E	E	V	E	M	I	T	K	G	R	H	D	P	C	V	G	I	R	A	V	P	I	A	E	A	M	L	A	I	V	L	M	D	H	L	L	R	Q	R	A	Q	N	A	D	V	K	T	D	I	P	R
Query Conservation
Alig confidence																																																.	.
Template Conservation																																																.	.
Template Sequence		L	X	S	V	D	I	E	T	H	E	P	Y	K	A	T	V	E	R	S	D	P	T	A	L	P	A	A	G	X	V	X	E	A	V	V	A	T	V	L	A	Q	E	I	L	E	K	.	.	F	S	S	D	N	L	E	E	L	K	E
Template Known Secondary structure							T	T	T									S	S			S																										.	.	S			S	B
Template Predicted Secondary structure																																																.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions