Job Description P12008 Confidence 100.00% Date Thu Jan 5 11:33:05 GMT 2012 Rank 4 Aligned Residues 301 % Identity 41% Template d1q1la_ SCOP info Chorismate synthase, AroC Chorismate synthase, AroC Chorismate synthase, AroC Resolution 2.05

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	F	R	V	T	T	F	G	E	S	H	G	L	A	L	G	C	I	V	D	G	V	P	P	G	I	P	L	T	E	A	D	L	Q	H	D	L	D	R	R	R	P	G	T	S	R	Y	T	T	Q	R	R	E	P	D	Q	V	K	I	L	S	G	V	F	E	G	V	T	T	G	T	S	I	G	L	L	I	E	N
Query Conservation
Alig confidence																																																.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		R	Y	L	R	F	L	T	A	G	E	S	H	G	K	G	L	T	A	I	L	E	G	I	P	A	N	L	P	L	S	E	E	E	I	N	H	E	L	R	R	R	Q	R	G	Y	G	.	.	.	.	.	.	I	E	K	D	T	A	E	I	L	S	G	V	R	F	G	K	T	L	G	S	P	I	A	L	F	I	R	N
Template Known Secondary structure		S	S									T	T	S	S											B	T		B															T	T			.	.	.	.	.	.			S								S			T	T				S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	Q	R	S	Q	D	Y	S	A	I	K	D	V	F	R	P	G	H	A	D	Y	T	Y	E	Q	K	Y	G	L	R	D	Y	R	G	G	G	R	S	S	A	R	E	T	A	M	R	V	A	A	G	A	I	A	K	K	Y	L	A	E	K	F	G	I	E	I	R	G	C	L	T	Q	M	G	D	I	P	L	D	I
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																											.
Template Conservation										.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		R	D	W	G	G	I	K	Y	.	.	.	.	.	.	.	.	.	N	Q	R	D	L	R	N	.	.	.	.	.	.	.	.	.	.	I	L	E	R	A	S	A	R	E	T	A	A	R	V	A	V	G	A	V	C	K	K	F	L	S	E	.	F	G	I	K	I	G	S	F	V	V	S	I	G	Q	K	E	V	E	E
Template Known Secondary structure		S				T	T	T	T	.	.	.	.	.	.	.	.	.	T		S	S	T			.	.	.	.	.	.	.	.	.	.						S	G	G	G																	T	.	T	T											T	T				G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		84	.	.	.	.	.	90	.										.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
																168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	W	S	Q	V	E	Q	N	P	F	F	C	P	D	P	D	K	I	D	A	L	D	E	L	M	R	A	L	K	K	E	G	D	S	I	G	A	K	V	T	V	V	A	S	G	V	P	A	G	L	G	E	P	V	F	.	.	D	R	L	D	A	D	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.
Template Conservation
Template Sequence		L	K	D	K	S	Y	F	A	N	P	E	K	L	L	S	Y	H	E	K	A	E	D	S	E	L	R	I	P	F	P	E	K	D	E	E	F	K	T	Y	I	D	E	V	K	E	K	G	E	S	L	G	G	V	F	E	V	F	A	L	N	V	P	P	G	L	G	S	H	I	Q	W	D	R	R	I	D	G	R	I	A
Template Known Secondary structure		G	S	S	G	G	G	G	G													T	T	S	T	T			S		G	G	G													T	T	T													S			T	T		S		S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		H	A	L	M	S	I	N	A	V	K	G	V	E	I	G	D	G	F	D	V	V	A	L	R	G	S	Q	N	R	D	E	I	T	K	D	G	.	.	.	.	.	F	Q	S	N	H	A	G	G	I	L	G	G	I	S	S	G	Q	Q	I	I	A	H	M	A	L	K	P	T	S	S	I	T	V	P	G	R	T	I	N
Query Conservation																																						.	.	.	.	.
Alig confidence																																						.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Q	A	X	X	S	I	Q	A	I	K	G	V	E	I	G	L	G	F	E	A	A	R	R	F	G	S	Q	V	H	D	E	I	G	W	S	E	G	K	G	Y	F	R	H	S	N	N	L	G	G	T	E	G	G	I	T	N	G	X	P	I	V	V	R	V	A	X	K	P	I	P	T	I	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	S	T	T							T	T	G	G	G	G	G	G	S		G	G	G	T								T	T	T					S			T	T	T	T			T	T				S	S															.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	G	E	E	V	E	M	I	T	K	G	R	H	D	P	C	V	G	I	R	A	V	P	I	A	E	A	M	L	A	I	V	L	M	D	H	L	L	R	Q	R	A	Q	N	A	D	V	K	T	D	I	P	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	V	P	A	A	S	V	V	G	E	A	X	L	A	I	V	L	A	D	A	L	L	E	K	.	.	L	G	G	D	F	X	E	E	V	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.				S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
																		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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