Job Description P12008 Confidence 22.99% Date Thu Jan 5 11:33:05 GMT 2012 Rank 24 Aligned Residues 85 % Identity 14% Template c3rggD_ PDB info PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air Resolution 1.82 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	K	Y	L	A	E	K	F	G	I	E	I	R	G	C	L	T	Q	M	G	D	I	P	L	D	I	K	D	W	S	Q	V	E	Q	N	P	F	F	C	P	D	P	D	K	I	D	A	L	D	E	L	M	R	A	L	K	K	E	G	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	S	E	L	K	T	.	F	G	I	E	Y	A	I	R	I	G	S	A	H	K	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	V	V	S	M	L	K	E	Y	E	A	L	D	R	P	K	L	Y	I	T	I	A	G	R	S	N	A	L	S	G	F	V	D
Template Known Secondary structure									.	T	T										T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	S	S	S										S	S
Template Predicted Secondary structure									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	T	V	V	A	S	G	V	P	A	G	L	G	E	P	V	F	D	R	L	D	A	D	I	A	H	A	L	M	S	I	N	A	V	K	G	V	E	I	G	D	G	F	D	V	V
Query Conservation
Alig confidence																	.	.							.									.
Template Conservation																	.	.							.									.
Template Sequence		G	F	V	K	G	A	T	I	A	C	P	P	P	S	D	.	.	S	F	A	G	A	D	.	I	Y	S	S	L	R	M	P	.	S	G	I	S	P	A	L	V	L	E	P	K	N	A	A
Template Known Secondary structure				S	S	S											.	.	G	G	G	G	G	G	.	G								.	T	T							S	S
Template Predicted Secondary structure																	.	.							.									.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.		.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions