Job Description P12008 Confidence 100.00% Date Thu Jan 5 11:33:05 GMT 2012 Rank 3 Aligned Residues 346 % Identity 38% Template c1ztbA_ PDB info PDB header:ligase Chain: A: PDB Molecule:chorismate synthase; PDBTitle: crystal structure of chorismate synthase from mycobacterium2 tuberculosis Resolution 2.65 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	R	V	T	T	F	G	E	S	H	G	L	A	L	G	C	I	V	D	G	V	P	P	G	I	P	L	T	E	A	D	L	Q	H	D	L	D	R	R	R	P	G	T	S	R	Y	T	T	Q	R	R	E	P	D	Q	V	K	I	L	S	G	V	F	E	G	V	T	T	G	T	S	I	G	L	L	I	E	N	T
Query Conservation
Alig confidence																																																.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		M	L	R	W	I	T	A	G	E	S	H	G	R	A	L	V	A	V	V	E	G	M	V	A	G	V	H	V	T	S	A	D	I	A	D	Q	L	A	R	R	R	L	G	Y	G	R	.	.	.	.	G	A	E	R	D	A	V	T	V	L	S	G	I	R	H	G	S	T	L	G	G	P	I	A	I	E	I	G	N	T
Template Known Secondary structure											T	T	S	S								S																				T			T	T		.	.	.	.												S			T	T				S	S									T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		89	90	.	.	.										.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure							.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																							.
Query SS confidence							.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																							.
Query Sequence		D	Q	R	S	Q	.	.	.	.	.	.	.	.	.	D	Y	S	A	I	K	D	V	.	.	.	.	.	.	.	.	F	R	P	G	H	A	D	Y	T	Y	E	Q	K	Y	G	L	R	D	Y	R	G	G	.	G	R	S	S	A	R	E	T	A	M	R	V	A	A	G	A	I	A	K	K	Y	L	A	E	K	F	G
Query Conservation							.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																							.
Alig confidence							.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		E	W	P	K	W	E	T	V	M	A	A	D	P	V	D	P	A	E	L	A	D	V	A	R	N	A	P	L	T	R	P	R	P	G	H	A	D	Y	A	G	M	L	K	Y	G	F	D	D	A	R	P	V	L	E	R	A	S	A	R	E	T	A	A	R	V	A	A	G	T	V	A	R	A	F	L	R	Q	A	L	G
Template Known Secondary structure		T		T	T	T	T	T	T	T		S	S									T		S	T	T					S			T	T	S	S									T		S	S	S								S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																																								.
Query SS confidence																				.	.	.	.	.	.																																																								.
Query Sequence		I	E	I	R	G	C	L	T	Q	M	G	D	I	P	L	D	I	K	.	.	.	.	.	.	D	W	S	Q	V	E	Q	N	P	F	F	C	P	D	P	D	K	I	D	A	L	D	E	L	M	R	A	L	K	K	E	G	D	S	I	G	A	K	V	T	V	V	A	S	G	V	P	A	G	L	G	E	P	V	F	.
Query Conservation																				.	.	.	.	.	.																																																								.
Alig confidence																				.	.	.	.	.	.																																																								.
Template Conservation
Template Sequence		V	E	V	L	S	H	V	I	S	I	G	A	S	A	P	Y	E	G	P	P	P	R	A	E	D	L	P	A	I	D	A	S	P	V	R	A	Y	D	K	A	A	E	A	D	M	I	A	Q	I	E	A	A	K	K	D	G	D	T	L	G	G	V	V	E	A	V	A	L	G	L	P	V	G	L	G	S	F	T	S	G
Template Known Secondary structure												T	T						S				G	G	G					T	T	T	S	T	T			S	S																		T			B										S			T	T		B		S	S	S	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
			224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																													.	.	.	.
Query SS confidence		.																																													.	.	.	.
Query Sequence		.	D	R	L	D	A	D	I	A	H	A	L	M	S	I	N	A	V	K	G	V	E	I	G	D	G	F	D	V	V	A	L	R	G	S	Q	N	R	D	E	I	T	K	D	G	.	.	.	.	F	Q	S	N	H	A	G	G	I	L	G	G	I	S	S	G	Q	Q	I	I	A	H	M	A	L	K	P	T	S	S	I
Query Conservation		.																																													.	.	.	.
Alig confidence		.																																													.	.	.	.
Template Conservation
Template Sequence		D	H	R	L	D	S	Q	L	A	A	A	V	M	G	I	Q	A	I	K	G	V	E	I	G	D	G	F	Q	T	A	R	R	R	G	S	R	A	H	D	E	M	Y	P	G	P	D	G	V	V	R	S	T	N	R	A	G	G	L	E	G	G	M	T	N	G	Q	P	L	R	V	R	A	A	M	K	P	I	S	T	V
Template Known Secondary structure		G	G	S											T	S	T	T							T	T					T	T	S						S							T	T	S				S			T	T	T	T			T	T				S	S												S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	P	G	R	T	I	N	R	F	G	E	E	V	E	M	I	T	K	G	R	H	D	P	C	V	G	I	R	A	V	P	I	A	E	A	M	L	A	I	V	L	M	D	H	L	L	R	Q	R	A	Q	N	A	D	V	K	T	D	I	P	R
Query Conservation
Alig confidence																																																			.	.
Template Conservation																																																			.	.
Template Sequence		P	R	A	L	A	T	V	D	L	A	T	G	D	E	A	V	A	I	H	Q	R	S	D	V	C	A	V	P	A	A	G	V	V	V	E	T	M	V	A	L	V	L	A	R	A	A	L	E	K	.	.	F	G	G	D	S	L	A	E	T	Q	R
Template Known Secondary structure		T	T	T						T	T	T	S	S							S				S	B																									.	.				S	B
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions