 |
Job Description | P36678 | Confidence | 4.22% | Date | Thu Jan 5 11:53:44 GMT 2012 |
Rank | 85 | Aligned Residues | 56 |
% Identity | 11% | Template | c2fpgA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain, |
PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp
|
Resolution | 2.96 Å |
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | T | Q | P | I | K | N | I | L | L | E | E | A | K | R | E | N | L | A | I | T | L | E | N | G | P | D | N | T | L | T | I | H | P | V | T | A | P | L | E | N | V | S | R | W | L | T | T | A | Q | V | T | Y | G | I | V | I | E |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |
|   |
|
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |
|
|   |
| . | . | . |   |
|
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|
|
Template Sequence |   |
S | R | S | G | T | L | T | Y | E | A | V | H | Q | T | T | Q | V | G | L | G | Q | S | L | C | V | G | I | G | G | D | P | . |
. |
. |
F | N | G | T | D | F | T | D | C | L | E | I | F | L | N | D | P | A | T | E | G | I | I | L | I |
Template Known Secondary structure |   |
 | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
| S | S | S | . | . | . | S |
| S |
|
|  |  |  |  |  |  |  |  |  | T |
| T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|