Job Description P32690 Confidence 100.00% Date Thu Jan 5 11:50:14 GMT 2012 Rank 1 Aligned Residues 410 % Identity 20% Template c3nb2B_ PDB info PDB header:ligase Chain: B: PDB Molecule:secreted effector protein; PDBTitle: crystal structure of e. coli o157:h7 effector protein nlel Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	L	M	D	K	D	A	Q	G	Y	I	D	L	S	D	L	D	L	T	S	C	H	F	K	G	D	V	I	S	K	V	S	F	L	S	S	N	L	Q	H	V	T	F	E	C	K	E	I	G	D	C	N	F	T	T	A	I	V	D	N	V	I	F	R	C	R	R	L	H	N	V	I	F	I	K	A	S	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	T	A	D	L	I	W	L	S	A	N	R	T	G	E	E	S	A	E	E	L	N	Y	S	G	C	D	L	S	G	L	S	L	V	G	L	N	L	S	S	V	N	F	S	G	A	V	L	D	D	T	D	L	R	M	S	D	L	S	Q	A	V	L	E	N	C	S	F	K	N	S	I	L	N	E	C	N	F	C
Template Known Secondary structure													T			S								B		T	T		B		T	T		B			S		B		T	T		B		T	T		B		T	T		B		T	T		B		T	T		B		T	T									T	T		B		T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.
Predicted Secondary structure																																						.	.														.																											.
Query SS confidence																																						.	.														.																											.
Query Sequence		C	V	D	F	S	K	N	I	L	D	T	V	D	F	S	Q	S	Q	L	G	H	S	N	F	R	E	C	Q	I	R	N	S	N	F	D	N	.	.	C	Y	L	Y	A	S	H	F	T	R	A	E	F	.	L	S	A	K	E	I	S	F	I	K	S	N	L	T	A	V	M	F	D	Y	V	R	M	S	T	G	.	N
Query Conservation																																						.	.														.																											.
Alig confidence												.																										.	.														.				.	.	.																					.
Template Conservation												.																																													.	.	.
Template Sequence		Y	A	N	L	S	N	C	I	I	R	.	A	L	F	E	N	S	N	F	S	N	S	N	L	K	N	A	S	F	K	G	S	S	Y	I	Q	Y	P	P	I	L	N	E	A	D	L	T	G	A	I	I	I	P	G	M	.	.	.	V	L	S	G	A	I	L	G	D	V	K	E	L	F	S	E	K	S	N	T	I	N
Template Known Secondary structure		T		B		T	T					.				T	T		B		T	T		B		T	T		B		T	T		B		S	S	S			B		T	T		B		T	T					T	T		.	.	.			T	T		B					S	S	S	S		S	S	S	S
Template Predicted Secondary structure												.																																													.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		F	K	D	C	I	T	E	Q	L	E	L	T	I	D	Y	S	D	I	F	W	N	E	D	L	D	G	Y	I	N	N	I	I	K	M	I	D	T	L	P	D	N	A	M	I	L	K	S	V	L	A	V	K	L	V	M	.	.	Q	L	K	I	L	N	I	V	N	K	N	F	I	E	N	M	K	K	I	F	S	H	C
Query Conservation																																																									.	.
Alig confidence																												.	.																												.	.
Template Conservation																												.	.
Template Sequence		L	G	G	C	Y	I	D	L	S	D	I	Q	E	N	I	L	S	V	L	D	N	Y	T	K	S	N	.	.	K	S	I	L	L	T	M	N	T	S	D	D	K	Y	N	H	D	K	V	R	A	A	E	E	L	I	K	K	I	S	L	D	E	L	A	A	F	R	P	Y	V	K	M	S	L	A	D	S	F	S	I	H
Template Known Secondary structure			T	T						S	S	S	T	T		G	G	G	G	S		T	T	T		G	G	.	.	G								T	S		G	G	G														T	S		G	G	G	G	S	S														S	S	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		P	Y	I	K	D	P	I	I	R	S	Y	I	H	S	D	E	D	N	K	F	D	D	F	M	R	Q	H	R	F	S	E	V	N	F	D	T	.	Q	Q	M	I	D	F	I	N	R	F	N	T	N	K	W	L	I	D	K	N	N	N	F	F	I	Q	L	I	D	Q	A	L	R	S	T	D	D	M	I	K	A	N	V
Query Conservation																																						.
Alig confidence																																						.																																					.	.
Template Conservation																																																																											.	.
Template Sequence		P	Y	L	N	N	A	N	I	Q	Q	W	L	E	P	I	C	D	D	F	F	D	T	I	M	S	W	F	N	N	S	I	M	M	Y	M	E	N	G	S	L	L	Q	A	G	M	Y	F	E	R	H	P	G	A	M	V	S	Y	N	S	S	F	I	Q	I	V	M	N	G	S	R	R	D	G	.	.	M	Q	E	R	F
Template Known Secondary structure		T	T	T	T																								T	T	S																					T	T					T												T	T	S	T	T	.	.	S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		W	H	L	Y	K	E	W	I	R	S	D	D	V	S	P	I	F	I	E	T	E	D	N	L	R	T	F	N	T	N	E	L	T	R	N	D	N	.	.	.	.	I	F	I	L	F	S	S	V	D	D	G	P	V	M	V	V	S	S	Q	R	L	H	D	M	L	N	P	T	K	D	T	N	W	N	S	T	Y	I	Y
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.
Template Conservation
Template Sequence		R	E	L	Y	E	V	Y	L	K	N	E	K	V	Y	P	V	T	Q	Q	S	D	F	G	L	C	D	G	S	G	K	P	D	W	D	D	D	S	D	L	A	Y	N	W	V	L	L	S	S	Q	D	D	G	M	A	M	M	C	S	L	S	H	M	V	D	M	L	S	P	N	T	S	T	N	W	M	S	F	F	L	Y
Template Known Secondary structure									T	T	S	T	T	T					T	S	T	T	B	T	T	S	S	S	S	S				T	T		T	T	S		S	B							S	S	S	S																S			T	T			S			S
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	H	E	M	L	P	V	N	L	T	Q	E	T	L	F	S	S	K	S	H	G	K	Y	A	L	F	P	I	F	T	A	S	W	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		K	D	G	E	V	Q	N	T	F	G	Y	S	L	S	N	L	F	S	E	S	.	.	.	.	.	.	.	F	P	I	F	S	I	P	Y	H
Template Known Secondary structure			T	T					T	T	S										T	.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.								.	.	.	.	.	.	.	.	600