Job Description P32690 Confidence 4.07% Date Thu Jan 5 11:50:14 GMT 2012 Rank 70 Aligned Residues 136 % Identity 14% Template c3g06A_ PDB info PDB header:ligase Chain: A: PDB Molecule:ssph2 (leucine-rich repeat protein); PDBTitle: the salmonella virulence effector ssph2 functions as a2 novel e3 ligase Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	S	C	H	F	K	G	D	V	I	S	K	V	S	F	L	S	S	N	L	Q	H	V	T	F	E	C	K	E	I	G	D	C	N	F	T	T	A	I	V	D	N	V	I	F	R	C	R	R	L	H	N	V	I	F	I	K	A	S	G	E	C	V	D	F	S	K	N	I	L	D	T	V	D	F	S	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	C	K	L	W	A	Y	N	N	Q	L	T	S	L	P	M	L	P	S	G	L	Q	E	L	S	V	S	D	N	Q	L	A	S	L	P	T	L	P	S	E	L	Y	K	L	W	A	Y	N	N	R	L	T	S	L	P	A	L	P	S	G	L	K	E	L	I	V	S	G	N	R	L	T	S	L	P	V	L	P	S
Template Known Secondary structure		T								S	S			S							T	T								S	S			S							T	T								S	S			S	S						T	T								S	S			S							T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	G	H	S	N	F	R	E	C	Q	I	R	N	S	N	F	D	N	C	Y	L	Y	A	S	H	F	T	R	A	E	F	L	S	A	K	E	I	S	F	I	K	S	N	L	T	A	V	M	F	D	Y	V	R	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	K	E	L	M	V	S	G	N	R	L	T	S	L	P	M	L	P	S	G	L	L	S	L	S	V	Y	R	N	Q	L	T	R	L	P	E	S	L	I	H	L	S	S	E	T	T	V	N	L	E	G	N	P	L	S
Template Known Secondary structure		T								S	S			S							T	T								S	S				S			G	G	G	G	G	S		T	T							S
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions