Return to main results Retrieve Phyre Job Id

Job DescriptionP32690
Confidence99.90%DateThu Jan 5 11:50:14 GMT 2012
Rank3Aligned Residues162
% Identity13%Templatec3du1X_
PDB info PDB header:structural proteinChain: X: PDB Molecule:all3740 protein; PDBTitle: the 2.0 angstrom resolution crystal structure of hetl, a pentapeptide2 repeat protein involved in heterocyst differentiation regulation from3 the cyanobacterium nostoc sp. strain pcc 7120
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 


































































Query SS confidence 















































































Query Sequence  LMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNVIFIKASGECV
Query Conservation 
 

 
  




 


  
 



 
   







 
 
  
 
  



 
 
  
 
  
 
  
 
  
 
  
Alig confidence 















































































Template Conservation   
     
  

    
 
  
    
 

 
  
 
  
                             
          
Template Sequence  ILRHYAAGKRNFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREADLSEAILWGIDLSEADLYRAILREA
Template Known Secondary structure  TT

B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
Template Predicted Secondary structure 


























































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   91........100.........110.......
Predicted Secondary structure 






















.....................................................
Query SS confidence 


























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  DFSKNILDTVDFSQSQLGHSNFRECQI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 


 
 
  
 
  
 
  



 
 
.....................................................
Alig confidence 


























.....................................................
Template Conservation                                                                                  
Template Sequence  DLTGAKLVKTRLEEANLIKASLCGANLNSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHANLDGA
Template Known Secondary structure  B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
S

SS


B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
Template Predicted Secondary structure 





































































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   118.120.........130.........140.........150.........160.........170.....
Predicted Secondary structure  ...............




















































Query SS confidence  . . . . . . . . . . . . . . .

























































Query Sequence  . . . . . . . . . . . . . . . RNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDYVRMSTGNFKDCITEQLEL
Query Conservation  ...............  
 
  
 
  


 

 
  
    
  



 
 
 

 





 


    

Alig confidence  ...............






















...































Template Conservation                          
  
 
  
 
  
... 
  
 
  
 
  
 
  
 
  
 
  
 
Template Sequence  KLCRANFGRTIQWGNLAADLSGASLQGADLSYANLESA. . . ILRKANLQGADLTGAILKDAELKGAIMPDGSI
Template Known Secondary structure  B
TT
B


BTTTTTB

B
TT
B
TT
B
TT
B
TT
...B
TT
B
TT
B
TT
B
TT
B
TT
B
TTS
B
Template Predicted Secondary structure 





























...































Template SS confidence 








































































   166...170.........180.........190.........200... ......210.........220.........230.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions