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Job DescriptionP32690
Confidence99.90%DateThu Jan 5 11:50:14 GMT 2012
Rank5Aligned Residues166
% Identity19%Templatec2xt4B_
PDB info PDB header:cell cycleChain: B: PDB Molecule:mcbg-like protein; PDBTitle: structure of the pentapeptide repeat protein albg, a2 resistance factor for the topoisomerase poison albicidin.
Resolution2.394 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNV. . . . . . . . . . .
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Template Sequence  MPAKTLESKDYCGESFVSEDRSGQSLESIRFEDCTFRQCNFTEAELNRCKFRECEFVDCNLSLISIPQTSFMEVRFVDCK
Template Known Secondary structure 







SS
S
B
TT
S
S
S
B
TT
S
S
B
TT
B
TT
S
B
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140......
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Query Sequence  . . . . . . . . . . . . . . IFIKASGECVDFSKNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFI
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Template Sequence  MLGVNWTSAQAGALSFERCILNDSLFYGLYLAGVKMVECRIHDANFTEADCEDADFTQSDLKGSTFHNTKLTGA. . . SFI
Template Known Secondary structure 
TT
B
TT
S
B
TT
B
TT
B
TT
S
B

S
B
TT
B
TT
B
TT
B
TT
BBSS
B
TT
...T
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   81........90.........100.........110.........120.........130.........140.........150.... ...
 
   147..150.........160.........170.. .... ...180
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Query Sequence  KSNLTAVMFDYVRMSTGNFKDCITEQ. LELT. IDYS
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Template Sequence  DAVNYHIDIFHNDIKRARFSLPEAASLLNSLDIELS
Template Known Secondary structure  T
BS

B
TTSS

TT

TTGGGGGGGGS




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   164.....170.........180.........190.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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