Return to main results Retrieve Phyre Job Id

Job DescriptionP09162
Confidence14.59%DateThu Jan 5 11:02:07 GMT 2012
Rank29Aligned Residues54
% Identity13%Templated1mqsa_
SCOP infoSec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.........90.........100.........110.........120......
Predicted Secondary structure 
























Query SS confidence 



























































Query Sequence  KRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSAVLSDSAVMAMLKQ
Query Conservation    
 


   
    


 

 

  
 
  


  
 

      
 


  
   
  
Alig confidence 






....































..














Template Conservation      


....







 

 

  
          




..
 


   

  
  
Template Sequence  SYNKSLV. . . . FVVGGGNYLEYQNLQEWAHSQLHNPKKVXYGS. . TAITTPAEFLNEISR
Template Known Secondary structure 

S....T
B
TT

SS

..SSB

Template Predicted Secondary structure 


....








..




Template SS confidence 



























































   602...... .610.........620.........630.........640 .........650.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions