Job Description P0AFH8 Confidence 98.12% Date Thu Jan 5 11:26:19 GMT 2012 Rank 1 Aligned Residues 118 % Identity 22% Template c2kgsA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922; PDBTitle: solution structure of the amino-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		D	N	I	K	S	T	D	I	S	V	K	T	D	Q	K	V	V	T	L	S	G	F	V	E	S	Q	A	Q	A	E	E	A	V	K	V	A	K	G	V	.	.	E	G	V	T	S	V	S	D	K	L	H	V	R	D	A	K	E	G	S	V	K	G	Y	A	G	D	T	A	T	T	S	E	I	K	A	K	L	L	A
Query Conservation																																									.	.
Alig confidence																																									.	.				.																												.	.	.	.	.	.	.	.
Template Conservation																																														.																												.	.	.	.	.	.	.	.
Template Sequence		S	A	L	S	L	S	L	L	S	I	S	R	S	G	N	T	V	T	L	I	G	D	F	P	D	E	A	A	K	A	A	L	M	T	A	L	N	G	L	L	A	P	G	V	.	N	V	I	D	Q	I	H	V	D	P	V	V	R	S	L	D	F	S	S	A	E	P	V	F	T	A	S	.	.	.	.	.	.	.	.
Template Known Secondary structure															S	S									S														T	T			T	T		.										T	T						G	G	G									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.																												.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	I	V	P	S	R	H	V	K	V	E	T	T	D	G	V	V	Q	L	S	G	T	V	D	S	Q	A	Q	S	D	R	A	E	S	I	A	K	A	V	D	G	V	K	S	V	K	N	D	L	K	T
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	P	I	P	D	F	G	L	K	V	E	R	D	T	V	T	L	T	G	T	A	P	S	S	E	H	K	D	A	V	K	R	A	A	T	S	T	W	P	D	M	K	I	V	N	N	I	E	V
Template Known Secondary structure		.	.	.	T	T		T	T								T									S	S																T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions