 |
Job Description | P0AFH8 | Confidence | 8.39% | Date | Thu Jan 5 11:26:19 GMT 2012 |
Rank | 41 | Aligned Residues | 47 |
% Identity | 15% | Template | c2e3uA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:hypothetical protein ph1566; |
PDBTitle: crystal structure analysis of dim2p from pyrococcus horikoshii ot3
|
Resolution | 2.30 Å |
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | V | K | V | E | T | T | D | G | V | V | Q | L | S | G | T | V | D | S | Q | A | Q | S | D | R | A | E | S | I | A | K | A | V | D | G | V | K | S | V | K | N | D | L | K | T | K |
Query Conservation |   |
  |   |
|   |
|   |
|   |   |
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
S | G | A | S | V | S | V | Y | G | K | T | V | A | I | I | G | N | P | I | Q | I | E | I | A | K | T | A | I | E | K | L | A | R | G | S | P | H | G | S | V | Y | R | Y | L | E | R | R |
Template Known Secondary structure |   |
 |
|
|  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|