Job Description P0AFH8 Confidence 4.18% Date Thu Jan 5 11:26:19 GMT 2012 Rank 62 Aligned Residues 60 % Identity 15% Template c1i1gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		S	E	I	K	A	K	L	L	A	D	D	I	V	P	S	R	H	V	K	V	E	T	T	D	G	V	V	Q	L	S	G	T	V	D	S	Q	A	Q	S	D	R	.	A	E	S	I	A	K	A	V	D	G	V	K	S	V	K	N	D	L	K	T	K
Query Conservation																																											.
Alig confidence																	.	.																									.
Template Conservation																	.	.
Template Sequence		F	E	V	A	E	K	L	K	E	Y	D	F	V	K	E	.	.	L	Y	L	S	S	G	D	H	M	I	M	A	V	I	W	A	K	D	G	E	D	L	A	E	I	I	S	N	K	I	G	K	I	E	G	V	T	K	V	C	P	A	I	I	L	E
Template Known Secondary structure											S	T	T				.	.					S	S	S	S	S								S	S											T	T	T	T	S	T	T										S
Template Predicted Secondary structure																	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions