Job Description P14900 Confidence 100.00% Date Thu Jan 5 11:34:07 GMT 2012 Rank 19 Aligned Residues 203 % Identity 19% Template d1p3da3 SCOP info Ribokinase-like MurD-like peptide ligases, catalytic domain MurCDEF Resolution 1.70

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		95	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure					.																																																			.	.
Query SS confidence					.																																																			.	.
Query Sequence		D	I	E	.	L	F	C	R	E	A	Q	A	P	I	V	A	I	T	G	S	N	G	K	S	T	V	T	T	L	V	G	E	M	A	K	A	A	G	V	N	V	G	V	G	G	N	I	G	L	P	A	L	M	L	.	.	L	D	D	E	C	E	L	Y	V	L	E	L	S	S	F	Q	L	E	T	T	S	S	L	Q
Query Conservation					.																																																			.	.
Alig confidence					.																																																			.	.																						.
Template Conservation																																																																															.
Template Sequence		R	A	Q	X	L	A	E	I	X	R	F	R	H	G	I	A	V	A	G	T	H	G	K	T	T	T	T	A	X	I	S	X	I	Y	T	Q	A	K	L	D	P	T	F	V	N	G	G	L	V	K	S	A	G	K	N	A	H	L	G	A	S	R	Y	L	I	A	E	A	D	E	S	D	A	S	F	L	H	.	L	Q
Template Known Secondary structure												T	S							S	S	S																T	T												T	T	T	T							S	S	S									T	T	S	G	G	G	G	.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.
Predicted Secondary structure																																			.	.	.																				.																.	.	.	.	.
Query SS confidence																																			.	.	.																				.																.	.	.	.	.
Query Sequence		A	V	A	A	T	I	L	N	V	T	E	D	H	M	D	R	Y	P	F	G	L	Q	Q	Y	R	A	A	K	L	R	I	Y	E	.	.	.	N	A	K	V	C	V	V	N	A	D	D	A	L	T	M	P	I	R	G	.	A	D	E	R	C	V	S	F	G	V	N	M	G	D	Y	.	.	.	.	.	H	L	N	H
Query Conservation																																			.	.	.																				.																.	.	.	.	.
Alig confidence																																			.	.	.																				.																.	.	.	.	.
Template Conservation
Template Sequence		P	X	V	S	V	V	T	N	X	E	P	D	H	X	D	T	Y	E	G	D	F	E	K	X	K	A	T	Y	V	K	F	L	H	N	L	P	F	Y	G	L	A	V	X	C	A	D	D	P	V	L	X	E	L	V	P	K	V	G	R	Q	V	I	T	Y	G	F	S	E	Q	A	D	Y	R	I	E	D	Y	E	Q	T
Template Known Secondary structure			S											S	G	G	G	G	T	T														T	T	S		T	T							T	T													S							S	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	G	E	T	W	L	R	V	K	G	E	K	V	L	N	V	K	E	M	K	L	S	G	Q	H	N	Y	T	N	A	L	A	A	L	A	L	A	D	A	A	G	L	P	R	A	S	S	L	K	A	L	T	T	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	Q	G	H	Y	T	V	I	C	P	N	N	E	R	I	N	V	L	L	N	V	P	G	K	H	N	A	L	N	A	T	A	A	L	A	V	A	K	E	E	G	I	A	N	E	A	I	L	E	A	L	A	D	F	Q
Template Known Secondary structure		T	T									T	T									S	S		S																	T	T												T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions