Return to main results Retrieve Phyre Job Id

Job DescriptionP14900
Confidence99.11%DateThu Jan 5 11:34:07 GMT 2012
Rank32Aligned Residues109
% Identity11%Templated1j6ua2
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   299300....... ..310.........320.........330..... ....340.........350.........360.........370.
Predicted Secondary structure 




..









...














..
Query SS confidence 








. .



























. . .



































. .
Query Sequence  GLPHRFEVV. . LEHNGVRWINDSKATNVGSTEAALNGLH. . . VDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFG. .
Query Conservation      
 
 
..    
   


  
 
  
   

  
 ...      

 

         
          

  
..
Alig confidence 








..










.















...














......














..
Template Conservation 

 



 
      
  

 
. 



  
 

           


 
 
   
 ......       

 

 
   
Template Sequence  GVHRRFSIAFHDPETNIYVIDD. YAHTPDEIRNLLQTAKEVFENEKIVVIFQPHRGN. . . . . . FAKALQLADEVVVTEVY
Template Known Secondary structure 

TTSSTTTT.


S
SSS

B

......TTSS


B
Template Predicted Secondary structure 










.










......




Template SS confidence 















































































   296...300.........310....... ..320.........330.........340.........350. ........360........
 
   372.......380.........390.........400.........410.......
Predicted Secondary structure  ...



















Query SS confidence  . . .













































Query Sequence  . . . RDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASL
Query Conservation  ...     
             
 


  
   
  







  

 
Alig confidence  ...



























..









.




Template Conservation     
                           ..    
 

  .




Template Sequence  DSGKXIWDSLKSLGKEAYFVEKLPELEKVIS. . VSENTVFLFV. GAGDI
Template Known Secondary structure 

TT



SGGG

..

SS.
SST
Template Predicted Secondary structure 









..




.



Template SS confidence 
















































   377..380.........390.........400....... ..410....... ..420..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions