Job Description P14900 Confidence 100.00% Date Thu Jan 5 11:34:07 GMT 2012 Rank 15 Aligned Residues 333 % Identity 22% Template c3n2aA_ PDB info PDB header:ligase Chain: A: PDB Molecule:bifunctional folylpolyglutamate synthase/dihydrofolate PDBTitle: crystal structure of bifunctional folylpolyglutamate2 synthase/dihydrofolate synthase from yersinia pestis co92 Resolution 1.90 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		S	P	G	I	A	L	A	H	P	S	L	S	A	A	A	D	A	G	I	E	I	V	G	D	I	E	L	F	C	R	E	A	Q	A	P	I	V	A	I	T	G	S	N	G	K	S	T	V	T	T	L	V	G	E	M	A	K	A	A	G	V	N	V	G	V	G	G	N	I	G	L	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	P	I	E	L	G	L	E	R	V	K	Q	V	A	E	R	.	.	.	.	.	.	.	.	.	L	D	L	L	K	P	A	P	K	I	F	T	V	A	G	T	N	G	K	G	T	T	C	C	T	L	E	A	I	L	L	A	A	G	L	R	V	G	V	Y	S	S	P	H	L	L	R	Y	T	E	R	V	R	I
Template Known Secondary structure			T	T	S		S	S	S										.	.	.	.	.	.	.	.	.		T		S		S	S	S								S	S																T	T									S		S	S		G	G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
																																					143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	M	L	L	D	D	E	C	E	L	Y	V	L	E	L	S	S	F	Q	L	.	E	T	T	S	S	L	Q	A	V	A	A	T	I	L	N	V	T	E	D	H	M	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		Q	G	Q	E	L	S	E	A	E	H	S	H	S	F	A	Q	I	E	A	G	R	G	D	I	S	L	T	Y	F	E	F	G	T	L	S	A	L	Q	L	F	K	Q	A	K	L	D	V	V	I	L	E	V	G	L	G	G	R	L	D	A	T	N	I	V	D	S	D	V	A	A	I	T	S	I	A	L	D	H	T	D
Template Known Secondary structure		T	T																				T	T																				T	T		S							S	S	S	S	T	T	S	G	G	G	G	S			S											S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		R	Y	P	F	G	L	Q	Q	Y	R	A	A	K	L	R	I	Y	E	N	A	K	V	C	V	V	N	A	D	D	A	.	.	.	L	T	M	P	I	R	G	A	D	E	R	C	V	S	F	G	V	N	M	G	D	Y	H	L	N	H	Q	Q	G	E	T	W	L	R	V	K	G	E	K	V	L	N	V	K	E	M	K
Query Conservation																																.	.	.
Alig confidence																																.	.	.																.	.	.	.	.																					.	.	.	.
Template Conservation																																																		.	.	.	.	.																					.	.	.	.
Template Sequence		W	L	G	Y	D	R	E	S	I	G	R	E	K	A	G	V	F	R	G	G	K	P	A	V	V	G	E	P	D	M	P	Q	S	I	A	D	V	A	A	E	L	G	A	Q	L	Y	R	R	.	.	.	.	.	D	V	A	W	K	F	S	Q	N	G	W	H	W	Q	C	G	E	R	Q	L	.	.	.	.	T	G	L
Template Known Secondary structure			T	T		S										T	T			T	T	S							S	S													T						B	.	.	.	.	.	T	T	T													T	T				.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.																					.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	Q	H	N	Y	T	N	A	L	A	A	L	A	L	A	D	A	A	G	L	P	R	A	S	S	L	K	A	L	T	T	F	T	G	L	P	H	R	F	E	V	V	L	E	H	N	G	V	R	W	I	N	D	S	K	A	T	N	V	G	S	T	E	A	A	L	N	G	L	H	V	D	G	T	L	H	L	L
Query Conservation
Alig confidence																																																									.	.
Template Conservation																																																									.	.
Template Sequence		P	V	P	N	V	P	L	A	N	A	A	T	A	L	A	V	L	H	Y	S	E	L	P	L	S	D	E	A	I	R	Q	G	L	Q	A	A	S	L	P	G	R	F	Q	V	V	S	E	Q	P	L	L	I	L	D	V	.	.	A	H	N	P	H	A	A	R	Y	L	V	N	R	L	A	Q	V	G	K	V	R	A	V
Template Known Secondary structure					S	S																T																		T	T	S	S					T	T	T							.	.			S													T
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.						.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		L	G	G	D	G	K	S	A	D	F	S	P	L	A	R	Y	L	N	G	D	N	V	R	L	Y	C	F	G	R	D	G	A	Q	L	A	A	L	R	.	.	.	.	.	P	E	V	A	E	Q	T	E	T	M	E	Q	A	M	R	L	L	A	P	R	V	Q	P	G	D	M	V	L	L	S	P	A	C	A	S	L	D
Query Conservation																																								.	.	.	.	.
Alig confidence					.																																			.	.	.	.	.																														.	.	.					.
Template Conservation					.																																																																					.	.	.					.
Template Sequence		V	G	M	.	L	S	D	K	D	I	A	G	T	L	A	C	L	S	E	R	V	D	E	W	Y	C	A	P	L	E	G	P	R	G	A	S	A	G	Q	L	A	E	H	L	V	S	A	R	Q	F	S	D	V	E	T	A	W	R	Q	A	M	Q	D	A	D	T	Q	D	V	V	I	V	.	.	.	C	G	S	F	.
Template Known Secondary structure					.	B	T	T	S										T	T	T		S									T	T	T	B								T	T		S	S					S	S														T	T						.	.	.		S	S		.
Template Predicted Secondary structure					.																																																																					.	.	.					.
Template SS confidence
		348	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.				.	420	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	K	N	F	E	Q	R	G	N	E	F	A	R	L	A	K	E	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	H	T	V	A	H	V	M	A	A	L	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											423	.	.	.	.	.	.	430	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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