Job Description P14900 Confidence 99.55% Date Thu Jan 5 11:34:07 GMT 2012 Rank 30 Aligned Residues 118 % Identity 16% Template c3mvnA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp Resolution 1.90 Å

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		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		R	F	E	V	V	L	E	H	N	G	V	R	W	I	N	D	S	K	A	T	N	V	G	S	T	E	A	A	L	N	G	L	H	.	.	.	V	D	G	T	L	H	L	L	L	G	G	D	G	K	S	A	D	F	S	P	L	A	R	Y	L	N	G	D	N	V	R	L	Y	C	F	G	R	D	G	A	Q	L	A	A
Query Conservation																																			.	.	.
Alig confidence																		.																	.	.	.											.	.	.	.	.	.
Template Conservation																		.																														.	.	.	.	.	.
Template Sequence		R	L	E	V	K	G	V	V	N	N	I	T	V	Y	D	D	.	F	A	H	H	P	T	A	I	T	A	T	I	D	A	L	R	A	K	V	G	Q	Q	R	I	L	A	V	L	E	.	.	.	.	.	.	P	R	K	H	E	L	A	T	S	L	Q	D	A	D	S	V	F	I	Y	Q	P	W	Q	V	S	E	V	L
Template Known Secondary structure										T	T							.				S																T	T	S								.	.	.	.	.	.											T	T		S
Template Predicted Secondary structure																		.																														.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.							.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	R	P	E	V	A	E	Q	T	E	T	M	E	Q	A	M	R	L	L	A	P	R	V	Q	P	G	D	M	V	L	L	S	P	A	C	A	S	L	D	Q	F	K	N	F	E	Q	R	G	N	E	F	A	R	L	A	K	E	L
Query Conservation			.
Alig confidence			.																																.						.	.	.	.	.	.	.	.	.
Template Conservation																																			.						.	.	.	.	.	.	.	.	.
Template Sequence		A	N	L	A	Q	P	A	I	S	A	D	D	V	D	E	L	V	X	R	I	V	Q	Q	A	K	P	N	D	H	I	L	I	X	.	S	N	G	A	F	.	.	.	.	.	.	.	.	.	G	G	I	H	Q	K	L	L	T	A	L
Template Known Secondary structure		T	T			S						S	S														T	T							.		S	S		G	.	.	.	.	.	.	.	.	.	G	G									T
Template Predicted Secondary structure																																			.						.	.	.	.	.	.	.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440										.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions