Job Description P14900 Confidence 95.94% Date Thu Jan 5 11:34:07 GMT 2012 Rank 345 Aligned Residues 87 % Identity 13% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		N	V	V	I	I	G	L	G	L	T	G	L	S	C	V	D	F	F	L	A	R	G	V	T	P	R	V	M	D	T	R	M	T	P	P	G	L	D	K	L	P	E	A	V	E	R	H	T	G	S	L	N	D	E	.	.	.	.	.	.	W	L	M	A	A	D	L	I	V	A	S	P	G	I	A	L	A	H	P	S
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	I	I	I	G	G	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	V	V	I	I	N	K	D	R	E	L	C	E	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A	E	V	S	K	N	D	V	V	V	I	L	T	P	R	D	E	V	N	L	F
Template Known Secondary structure																						T	T								S												S	S	S					S		T	T	S								T			T	T								S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	A	A	D	A	G	I	E	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	Q	L	V	M	K	D	F	G	V	K	R
Template Known Secondary structure									T	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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