Job Description P14900 Confidence 96.35% Date Thu Jan 5 11:34:07 GMT 2012 Rank 273 Aligned Residues 87 % Identity 17% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.
Query Sequence		D	Y	Q	G	K	N	V	V	I	I	G	L	G	L	T	G	L	S	C	V	D	F	F	L	A	R	G	V	T	P	R	V	M	D	T	R	M	T	P	P	G	L	D	K	L	P	E	A	V	E	R	H	T	G	S	L	N	D	.	.	.	.	.	.	E	W	L	M	A	A	D	L	I	V	A	S	P	G	I	A
Query Conservation																																																												.	.	.	.	.	.
Alig confidence						.																															.																							.	.	.	.	.	.
Template Conservation						.																															.
Template Sequence		D	I	C	N	.	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	.	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G
Template Known Secondary structure					S	.								S													T	T								S	.											T	T						S		T	T	S							T	T	G	G	G		S							S
Template Predicted Secondary structure						.																															.
Template SS confidence
		415	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	H	P	S	L	S	A	A	A	D	A	G	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P
Template Known Secondary structure																S
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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