Job Description P14900 Confidence 100.00% Date Thu Jan 5 11:34:07 GMT 2012 Rank 7 Aligned Residues 297 % Identity 20% Template c3eagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides Resolution 2.55 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																		.																														.																.
Query SS confidence																		.																														.																.
Query Sequence		Q	G	K	N	V	V	I	I	G	L	G	L	T	G	L	S	.	C	V	D	F	F	L	A	R	G	V	T	P	R	V	M	D	T	R	M	T	P	P	G	L	D	K	L	P	E	.	A	V	E	R	H	T	G	S	L	N	D	E	W	L	M	.	A	A	D	L	I	V	A	S	P	G	I	A	L	A	H	P	S
Query Conservation																		.																														.																.
Alig confidence																		.																														.																.
Template Conservation
Template Sequence		A	X	K	H	I	H	I	I	G	I	G	G	T	F	X	G	G	L	A	A	I	A	K	E	A	G	F	E	V	S	G	C	D	A	K	X	Y	P	P	X	S	T	Q	L	E	A	L	G	I	D	V	Y	E	G	F	D	A	A	Q	L	D	E	F	K	A	D	V	Y	V	I	G	N	V	A	K	R	G	X	D	V
Template Known Secondary structure										S			S													T	T								S	S			T	T								T	T						S			G	G	G	G	G	S				S						T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.	.			.
Predicted Secondary structure																								.	.																																			.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																								.	.																																			.	.	.	.	.	.	.	.	.											.	.
Query Sequence		L	S	A	A	A	D	A	G	I	E	I	V	G	D	I	E	L	F	C	R	E	A	.	.	Q	A	P	I	V	A	I	T	G	S	N	G	K	S	T	V	T	T	L	V	G	E	M	A	K	A	A	G	V	N	V	G	V	G	.	.	.	.	.	.	.	.	.	G	N	I	G	L	P	A	L	M	L	.	.	L
Query Conservation																								.	.																																			.	.	.	.	.	.	.	.	.											.	.
Alig confidence																								.	.																																			.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		V	E	A	I	L	N	L	G	L	P	Y	I	S	G	P	Q	W	L	S	E	N	V	L	H	H	H	W	V	L	G	V	A	G	T	H	G	K	T	T	T	A	S	X	L	A	W	V	L	E	Y	A	G	L	A	P	G	F	L	I	G	G	V	P	E	N	F	G	V	S	A	R	L	P	Q	T	P	R	Q	D	P
Template Known Secondary structure								T	T														T	G	G	G	S							S	S	S																T	T								S	S			T	T	S	S		S								S	S		T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.																																													.	.	.
Query SS confidence																	.	.	.	.	.	.																																													.	.	.
Query Sequence		D	D	E	C	E	L	Y	V	L	E	L	S	S	F	Q	.	.	.	.	.	.	L	E	T	T	S	S	L	Q	A	V	A	A	T	I	L	N	V	T	E	D	H	M	D	R	Y	P	F	G	L	Q	Q	Y	R	A	A	K	L	R	I	Y	E	N	A	K	.	.	.	V	C	V	V	N	A	D	D	A	L	T	M
Query Conservation																	.	.	.	.	.	.																																													.	.	.
Alig confidence																	.	.	.	.	.	.																											.																		.	.	.
Template Conservation																																																	.
Template Sequence		N	S	Q	S	P	F	F	V	I	E	A	D	E	Y	D	T	A	F	F	D	K	R	S	K	F	V	H	Y	R	P	R	T	A	V	L	N	N	L	E	F	D	H	A	D	I	F	A	.	D	L	G	A	I	Q	T	Q	F	H	Y	L	V	R	T	V	P	S	E	G	L	I	V	C	N	G	R	Q	Q	S	L	Q
Template Known Secondary structure		T	S												S				T	T					G	G	G	G	S			S												T	T	T	S	S	.	S													T	T	S		T	T	S						S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		P	I	R	G	.	.	A	D	E	R	C	V	S	F	G	V	N	M	G	D	Y	H	L	N	H	Q	Q	G	E	T	W	L	R	V	K	G	E	K	V	L	N	V	K	E	M	K	L	S	G	Q	H	N	Y	T	N	A	L	A	A	L	A	L	A	D	A	A	G	L	P	R	A	S	S	L	K	A	L	T	T	F
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		D	T	L	D	K	G	C	W	T	P	V	E	K	F	G	T	E	H	G	W	Q	A	G	E	A	N	A	D	G	S	F	D	V	L	L	D	G	K	T	A	G	R	V	K	W	D	L	X	G	R	H	N	R	X	N	A	L	A	V	I	A	A	A	R	H	V	G	V	D	I	Q	T	A	C	E	A	L	G	A	F
Template Known Secondary structure					T	T				S						S	S	S	S	S								T	T	S							T	T												S																		T												T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		298	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	L	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	V	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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