Job Description P14900 Confidence 100.00% Date Thu Jan 5 11:34:07 GMT 2012 Rank 11 Aligned Residues 287 % Identity 24% Template c2wtzC_ PDB info PDB header:ligase Chain: C: PDB Molecule:udp-n-acetylmuramoyl-l-alanyl-d-glutamate- PDBTitle: mure ligase of mycobacterium tuberculosis Resolution 3.00 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	A	Q	A	P	I	V	A	I	T	G	S	N	G	K	S	T	V	T	T	L	V	G	E	M	A	K	A	A	G	V	N	V	G	V	G	G	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	L	M	L	L	D	D	E	C	E	L	Y	V	L	E	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	E	R	L	T	V	I	G	I	T	G	T	S	G	K	T	T	T	T	Y	L	V	E	A	G	L	R	A	A	G	R	V	A	G	L	I	G	T	I	G	I	R	V	G	G	A	D	L	P	S	A	L	T	T	P	E	A	P	T	L	Q	A	M	L	A	A	M	V	E	R	G	V	D	T	V	V	M	E	V
Template Known Secondary structure		G	G	G	S	S							S	S	S																T	T							S	S	S					T	T						S	S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.
Predicted Secondary structure							.	.																																									.	.	.	.																				.
Query SS confidence							.	.																																									.	.	.	.																				.
Query Sequence		S	S	F	Q	L	.	.	E	T	T	S	S	L	Q	A	V	A	A	T	I	L	N	V	T	E	D	H	M	D	R	Y	P	F	G	L	Q	Q	Y	R	A	A	K	L	R	I	Y	E	.	.	.	.	N	A	K	V	C	V	V	N	A	D	D	A	L	T	M	P	I	R	G	.	A	D	E	R	C	V	S	F	G
Query Conservation							.	.																																									.	.	.	.																				.
Alig confidence							.	.																										.															.	.	.	.																				.
Template Conservation																																		.
Template Sequence		S	S	H	A	L	A	L	G	R	V	D	G	T	R	F	A	V	G	A	F	T	N	L	S	R	D	H	L	D	F	H	P	.	S	M	A	D	Y	F	E	A	A	S	L	F	D	P	D	S	A	L	R	A	R	T	A	V	V	C	I	D	D	D	A	G	R	A	M	A	A	R	A	A	D	A	I	T	V	S	A
Template Known Secondary structure									T	T	T	T	T				S									S			T	T	T	S	S	.	S									T	T	T		T	T	S	T	T			S							S	S											S	S						S
Template Predicted Secondary structure																																		.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		233	.	.	.	.	.							.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		V	N	M	G	D	Y	.	.	.	.	.	.	H	L	N	H	Q	Q	G	E	T	W	L	R	V	K	G	E	K	V	L	N	V	K	E	M	K	L	S	G	Q	H	N	Y	T	N	A	L	A	A	L	A	L	A	D	A	A	G	L	P	R	A	S	S	L	K	A	L	T	T	F	T	G	L	P	H	R	F	E	V
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																																													.							.
Template Conservation																																																																										.							.
Template Sequence		A	D	R	P	A	H	W	R	A	T	D	V	A	P	T	D	A	G	G	Q	Q	F	T	A	I	D	P	A	G	V	G	H	H	I	G	I	R	L	P	G	R	Y	N	V	A	N	C	L	V	A	L	A	I	L	D	T	V	G	V	S	P	E	Q	A	V	P	G	L	R	E	I	R	.	V	P	G	R	L	E	.
Template Known Secondary structure		S	S	S			S										T	T	T									T	T	S								S			S																	T	T															.		T	T	S	S	B	.
Template Predicted Secondary structure																																																																										.							.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	H	N	G	V	R	W	I	N	D	S	K	A	T	N	V	G	S	T	E	A	A	L	N	G	L	H	V	D	G	T	L	H	L	L	L	G	G	D	G	K	S	A	D	F	S	P	L	A	R	Y	L	N	G	D	N	V	R	L	Y	C	F	G	R	D	G	A	Q	L	A	A	L	R	P	E	V	A	E
Query Conservation
Alig confidence		.	.	.	.									.																	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation		.	.	.	.									.																	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		.	.	.	.	Q	G	F	L	A	L	V	D	.	Y	A	H	K	P	E	A	L	R	S	V	L	T	T	L	A	.	.	H	R	L	A	V	V	F	R	.	.	.	.	.	.	.	.	.	.	.	.	A	P	M	G	R	I	A	D	L	V	V	V	T	D	.	.	P	T	A	I	R	R	E	I	L	A	Q	V	V
Template Known Secondary structure		.	.	.	.									.				S										T	T		.	.									.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Predicted Secondary structure		.	.	.	.									.																	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
						380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.			.	.	.	.	.	.	410	.													.	.	.	.	.	.	.	.	420	.	.	.	.	.			.	.	.	.	430	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	E	T	M	E	Q	A	M	R	L	L	A	P	R	V	Q	P	G	D	M	V	L	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	A	D	R	R	D	A	I	R	H	A	V	A	W	A	R	P	G	D	V	V	L	I	A
Template Known Secondary structure					S														T	T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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