Return to main results Retrieve Phyre Job Id

Job DescriptionP77598
Confidence11.11%DateThu Jan 5 12:30:54 GMT 2012
Rank35Aligned Residues81
% Identity9%Templatec2hklB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l,d-transpeptidase; PDBTitle: crystal structure of enterococcus faecium l,d-2 transpeptidase c442s mutant
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90.........100... ......110.........
Predicted Secondary structure 




















.....






Query SS confidence 


























































. . . . .















Query Sequence  HIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRW. . . . . ITNIHEHKRYYYTFDN
Query Conservation   
    
  
        
 


  
   
  

  



 
 
 


   
 


  
..... 


     

     
Alig confidence 










































.


.










.....











.


Template Conservation   
       
 
  
 


 
        
   
  
      .   .          

   
 


  
 
  
.  
Template Sequence  KFKSTKRGEVTVPVGTYSWTIQTDSETEALKKAILAGQDFTRS. PIV. QGGTTADHPLIEDTYIEVDLENQHMWYY. KDG
Template Known Secondary structure 
SSS



SS

TTS

.

.SS
SSS
SS
S
TTTT.TT
Template Predicted Secondary structure 














..














.

Template SS confidence 















































































   284.....290.........300.........310.........320...... ... 330.........340.........350....... ..360
 
   120........
Predicted Secondary structure 

Query SS confidence 








Query Sequence  SLLFTESIQ
Query Conservation    

 
 
 
Alig confidence 








Template Conservation    
    
 
Template Sequence  KVALETDIV
Template Known Secondary structure 
B
Template Predicted Secondary structure 
Template SS confidence 








   361........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions