 |
Job Description | P24192 | Confidence | 20.09% | Date | Wed Jan 25 15:20:44 GMT 2012 |
Rank | 71 | Aligned Residues | 109 |
% Identity | 14% | Template | d7odca2 |
SCOP info | TIM beta/alpha-barrel
| PLP-binding barrel
| Alanine racemase-like, N-terminal domain
|
Resolution | 1.60 |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | H | L | R | E | R | A | S | H | L | S | Y | T | A | E | R | P | L | R | I | M | E | V | C | G | G | H | T | H | A | I | F | K | F | G | L | D | Q | L | L | P | E | N | V | E | F | I | H | G | P | G | C | P | V | C | V | L | P | M | G | R | I | D | T | C | V | E | I | A | S | H | P | E | V | I | F | C | T | F |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |
|
|   |
|
|   |   |   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   | . |   |   |
|   |
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
L | G | D | I | L | K | K | H | L | R | W | L | K | A | L | P | R | . |
V | T | P | F | Y | A | V | K | C | N | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | R | A | I | V | S | T | L | A | A | I | G | T | G | F | D | C | A | S | K | T | E | I | Q | L | V | Q | G | L | G | V | P | A | E | R | V | I | Y | A | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | . |  |  |  |  |  |  | G | G | G |
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | A | M | R | V | P | G | K | Q | G | S | L | L | Q | A | K | A | R | G | A | D | V | R | I | V | Y | S | P | M | D | A | L | K | L | A | Q | E | N | P | T | R | K | V | V | F |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   | . | . | . | . | . |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
P | C | K | Q | V | . |
. |
. |
. |
. |
S | Q | I | K | Y | A | A | S | N | G | V | Q | M | M | T | F | D | S | E | I | E | L | M | K | V | A | R | A | H | P | K | A | K | L | V | L |
Template Known Secondary structure |   |
S | S |
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | |
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|