Job Description P24192 Confidence 86.16% Date Wed Jan 25 15:20:44 GMT 2012 Rank 7 Aligned Residues 131 % Identity 16% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	E	Y	R	A	P	E	Q	V	M	Q	L	I	E	H	L	R	E	R	A	S	H	L	S	Y	T	A	E	R	P	L	R	I	M	E	V	C	G	G	H	.	.	.	.	.	.	.	.	.	.	.	.	T	H	A	I	F	K	F	G	L	D	Q	L	L	P	E	N	V	E	F	I	H	G	P	G	C	P	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																											.	.	.	.	.																																														.	.	.	.	.
Template Sequence		V	D	H	F	A	N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	.	.	.	.	.	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	L	T	T	G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	.	.	.	.	.
Template Known Secondary structure		G	G	G		T	T	T	T																		.	.	.	.	.	S	S									G	G	G	T		S	S																		S			S						G	G	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.																																														.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.				.	.	.	.	.	.	130	.								.	.	.	.	.
Predicted Secondary structure																						.																	.	.	.												.						.	.	.									.	.	.	.	.	.	.
Query SS confidence																						.																	.	.	.												.						.	.	.									.	.	.	.	.	.	.
Query Sequence		C	V	L	P	M	G	R	I	D	T	C	V	E	I	A	S	H	P	E	V	.	I	F	C	T	F	G	D	A	M	R	V	P	G	K	Q	G	.	.	.	S	L	L	Q	A	K	A	R	G	A	D	.	V	R	I	V	Y	.	.	.	S	P	M	D	A	L	K	L	.	.	.	.	.	.	.	A	Q	E	N	P
Query Conservation																						.																	.	.	.												.						.	.	.									.	.	.	.	.	.	.
Alig confidence		.	.																			.																	.	.	.												.						.	.	.									.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N	H	D	F	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I	P	K	I	A	V	M	P	Q	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A
Template Known Secondary structure		.	.	G															T	T										S	S																		T	T		S									S	S																		T
Template Predicted Secondary structure		.	.
Template SS confidence
				119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	K	V	V	F	F	G	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	P	I	I	T	M	S	M	S
Template Known Secondary structure		S	S								T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions