Job Description P24192 Confidence 23.78% Date Wed Jan 25 15:20:44 GMT 2012 Rank 59 Aligned Residues 101 % Identity 16% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	R	G	A	D	V	R	I	V	Y	S	P	M	D	A	L	K	L	A	Q	E	N	P	T	R	K	V	V	F	F	G	L	G	F	E	T	T	M	P	T	T	A	I	T	L	Q	Q	A	K	A	R	D	V	Q	N	F	Y	F	F	C	Q	H	I	T	L	I	P	T	L	R	S	L	L	E	Q	P	D	N
Query Conservation
Alig confidence																										.																											.	.	.																									.	.
Template Conservation																										.																											.	.	.																									.	.
Template Sequence		L	E	E	K	G	I	S	I	D	L	A	Y	N	C	E	E	A	I	G	K	I	F	S	N	.	K	Y	D	L	I	F	L	E	I	I	L	S	D	G	D	G	W	T	L	C	K	K	I	R	N	V	.	.	.	T	T	C	P	I	V	Y	X	T	Y	I	N	E	D	Q	S	I	L	N	A	L	N	S	G	.	.
Template Known Secondary structure					T	T								S										T		.			S						S			T	T														.	.	.			S							S													T	T	.	.
Template Predicted Secondary structure																										.																											.	.	.																									.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	A	F	L	A	P	G	H	V	S	M	V	I	G	T	D	A	Y	N	F	I	A	S	D	F	H	R	P	L	V	V	A	G	F	E	P	L	D	L	L	Q	G	V	V	M	L	V	Q	Q	K	I	A
Query Conservation
Alig confidence		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.
Template Conservation		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.
Template Sequence		.	G	D	D	Y	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	.	.	.	.	.	L	N	L	E	I	L	Y	A	K	V	K	A	I	L	R	R	X	N	S
Template Known Secondary structure		.		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	.	.	.	.	.																		T
Template Predicted Secondary structure		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.
Template SS confidence
			98	.	100	.	.	.																						.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions