 |
Job Description | P24192 | Confidence | 24.41% | Date | Wed Jan 25 15:20:44 GMT 2012 |
Rank | 57 | Aligned Residues | 84 |
% Identity | 11% | Template | c2nt3A_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:response regulator homolog; |
PDBTitle: receiver domain from myxococcus xanthus social motility protein frzs2 (y102a mutant)
|
Resolution | 1.30 Å |
|
 |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | A | K | A | R | G | A | D | V | R | I | V | Y | S | P | M | D | A | L | K | L | A | Q | E | N | P | T | R | K | V | V | F | F | G | L | G | F | E | T | T | M | P | T | T | A | I | T | L | Q | Q | A | K | A | R | D | V | Q | N | F | Y | F | F | C | Q | H | I | T | L | I | P | T | L | R | S | L | L | E | Q | P |
Query Conservation |   |
  |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   | . | . | . | . |
Template Sequence |   |
S | A | L | E | G | R | G | F | T | V | D | E | T | T | D | G | K | G | S | V | E | Q | I | R | R | D | R | P | D | L | V | V | L | A | V | D | L | S | A | G | Q | N | G | Y | L | I | C | G | K | L | K | K | D | D | D | L | K | N | V | P | I | V | I | I | G | N | P | D | G | F | A | Q | H | R | K | L | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | S | B |
| S | T | T |
| B |  |  |  |  |  |  |  |  |  |  | S | T | T | T | T | T | S |
|  |  |  |  |  |
| G | G | G |  |  |  |  |  | T | S | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
  |
  |   |
190 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | N | G | I | D | A | F | L |
Query Conservation |   |
  |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|
Template Sequence |   |
K | A | H | A | D | E | A | V |
Template Known Secondary structure |   |
S | S |
|
| S |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|