Job Description P24192 Confidence 43.94% Date Wed Jan 25 15:20:44 GMT 2012 Rank 28 Aligned Residues 213 % Identity 14% Template c1e5dA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas Resolution 2.5 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		A	P	E	Q	V	M	Q	L	I	E	H	L	R	E	R	A	S	H	L	S	Y	T	A	E	R	P	L	R	I	M	E	V	C	G	G	H	T	H	A	I	F	K	F	G	L	D	Q	L	L	P	E	N	V	E	F	I	H	G	P	G	C	P	V	C	V	L	P	M	.	.	G	R	I	D	T	C	V	E	I	A
Query Conservation																																																																						.	.
Alig confidence																			.	.	.	.	.	.	.	.																										.	.	.	.	.	.													.	.
Template Conservation																			.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		K	A	E	Y	K	G	E	L	L	C	G	I	A	S	V	I	D	.	.	.	.	.	.	.	.	P	K	K	I	D	Y	L	V	I	Q	H	L	E	L	D	H	A	G	A	L	P	A	L	I	E	.	.	.	.	.	.	A	C	Q	P	E	K	I	F	T	S	S	L	G	Q	K	A	M	E	S	H	F	H	Y	K
Template Known Secondary structure			G	G	G										T	T	S		.	.	.	.	.	.	.	.	G	G	G										S					T	T							.	.	.	.	.	.					S																			S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																														.																																		.	.	.	.	.	.	.	.
Query SS confidence																														.																																		.	.	.	.	.	.	.	.
Query Sequence		S	H	P	E	V	I	F	C	T	F	G	D	A	M	R	V	P	G	K	Q	G	S	L	L	Q	A	K	A	.	R	G	A	D	V	R	I	V	Y	S	P	M	D	A	L	K	L	A	Q	E	N	P	T	R	K	V	V	F	F	G	L	G	F	.	.	.	.	.	.	.	.	E	T	T	M	P	T	T	A	I	T
Query Conservation																														.																																		.	.	.	.	.	.	.	.
Alig confidence									.																					.										.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation									.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	P	V	Q	V	V	.	K	H	G	E	T	L	S	L	G	K	R	T	V	T	F	Y	E	T	R	M	L	H	W	P	D	S	M	V	S	W	.	.	.	.	.	.	.	.	.	.	.	F	A	D	E	K	V	L	I	S	N	D	I	F	G	Q	N	I	A	A	S	E	R	F	S	D	Q	I	P	V	H	T
Template Known Secondary structure		S							.		T	T						S	S									T	T	S	S	S	T	T						.	.	.	.	.	.	.	.	.	.	.		T	T	T	T						T	T	T							S			B	G	G	G	S
Template Predicted Secondary structure									.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.												.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.										.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.																								.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	Q	A	K	A	R	D	V	Q	N	F	Y	F	F	C	Q	H	I	T	L	I	P	T	L	R	S	L	L	E	Q	P	D	N	G	I	D	A	.	F	L	A	P	G	H	V	S	M	V	I	G	T	D	A	Y	N	F	I	A	S	D	F	.	.	.	.	.	.	.	.	.	H	R	P	L	V	V	A	G	F
Query Conservation																																								.																								.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																														.																								.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		L	E	R	A	M	.	.	.	.	R	E	Y	Y	A	N	I	V	N	P	Y	A	P	Q	T	L	K	A	I	E	T	L	V	G	A	G	V	A	P	E	F	I	C	P	D	H	G	V	I	F	R	G	A	D	Q	C	T	F	A	V	Q	K	Y	V	E	Y	A	E	Q	K	P	T	N	K	V	V	I	F	Y	D	S
Template Known Secondary structure							.	.	.	.								T	G	G	G														T	T				S					S	S	S		B			S																					S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		186	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	L	D	L	L	Q	G	V	V	M	L	V	Q	Q	K	I	A	A	H	S	K	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	W	H	S	T	E	K	M	A	R	V	L	A	E	S	F	R	D	E	G	C	T	V	K
Template Known Secondary structure		S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions