Job Description P69822 Confidence 91.23% Date Thu Jan 5 12:12:07 GMT 2012 Rank 23 Aligned Residues 84 % Identity 14% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																			.													.	.	.	.	.	.	.	.
Query SS confidence																																																			.													.	.	.	.	.	.	.	.
Query Sequence		M	T	V	R	I	L	A	V	C	G	N	G	Q	G	S	S	M	I	M	K	M	K	V	D	Q	F	L	T	Q	S	N	I	D	H	T	V	N	S	C	A	V	G	E	Y	K	S	E	L	S	.	G	A	D	I	I	I	A	S	T	H	I	A	.	.	.	.	.	.	.	.	G	E	I	T	V	T	G	N	K	Y
Query Conservation																																																			.													.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																																	.													.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		M	R	Q	R	I	L	V	V	D	D	D	A	.	.	.	.	.	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P
Template Known Secondary structure											S			.	.	.	.	.													T	T									G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	V	R	N	M	L	S	P	A	D	F	G	P	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	M	L	T	A	K	T	D	T	V	D	V	V	L	G	L	E
Template Known Secondary structure								T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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