Job Description P69822 Confidence 58.23% Date Thu Jan 5 12:12:07 GMT 2012 Rank 88 Aligned Residues 83 % Identity 8% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																		.	.													.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.													.	.	.	.	.	.	.	.
Query Sequence		T	V	R	I	L	A	V	C	G	N	G	Q	G	S	S	M	I	M	K	M	K	V	D	Q	F	L	T	Q	S	N	I	D	H	T	V	N	S	C	A	V	G	E	Y	K	S	E	L	S	.	.	G	A	D	I	I	I	A	S	T	H	I	A	.	.	.	.	.	.	.	.	G	E	I	T	V	T	G	N	K	Y
Query Conservation																																																		.	.													.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																																	.	.													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		S	L	N	A	I	I	I	D	D	H	P	.	.	.	.	.	L	A	I	A	A	I	R	N	L	L	I	K	N	D	I	E	I	L	A	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	I	Q	V	L	E	T	L	R	K	R	Q	Y	S	G
Template Known Secondary structure													.	.	.	.	.													T	T								S	S	S	T	T											S						T	T		S	S	S												T	T			S
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	V	R	N	M	L	S	P	A	D	F	G	P	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	I	I	V	S	A	K	D	H	F	Y	G	K	H	C	A	D
Template Known Secondary structure												S	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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