Job Description P69822 Confidence 25.80% Date Thu Jan 5 12:12:07 GMT 2012 Rank 176 Aligned Residues 97 % Identity 12% Template c2qsjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		M	T	V	R	I	L	A	V	C	G	N	G	Q	G	S	S	M	I	M	K	M	K	V	D	Q	F	L	T	Q	S	N	I	D	H	T	V	N	S	C	A	V	G	E	Y	K	S	E	L	S	G	A	D	I	I	I	A	S	T	H	I	A	G	E	I	T	V	T	.	.	.	G	N	K	Y	V	V	G	V	R	N
Query Conservation																																																																					.	.	.
Alig confidence				.											.																																																						.	.	.
Template Conservation				.											.
Template Sequence		L	T	.	V	V	L	I	V	D	D	H	H	L	.	I	R	A	G	A	K	N	L	L	E	G	A	F	S	G	M	R	V	E	G	A	E	T	V	S	D	A	L	A	F	L	E	A	D	N	T	V	D	L	I	L	L	D	V	A	I	D	G	L	V	R	L	K	R	F	D	P	S	N	A	V	A	L	I	S	G
Template Known Secondary structure				.							S				.														T	T							S	S										T	T				S																			T	T	S
Template Predicted Secondary structure				.											.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		78																				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	P	A	D	F	G	P	K	L	L	E	V	I	K	E	.	.	H	F	P	Q	D
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		E	H	E	L	I	R	A	A	L	E	A	G	A	D	G	F	I	P	K	S	A	D	P	Q	V	L	I	H	A	V	S	L	I	L	E	G	E	I	F	L	P	R	S
Template Known Secondary structure												T	T		S	B				T	T	S														T	T			B			S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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