Job Description P69822 Confidence 34.85% Date Thu Jan 5 12:12:07 GMT 2012 Rank 132 Aligned Residues 81 % Identity 12% Template c2hqrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.
Predicted Secondary structure																																																		.	.																		.	.	.	.	.
Query SS confidence																																																		.	.																		.	.	.	.	.
Query Sequence		V	R	I	L	A	V	C	G	N	G	Q	G	S	S	M	I	M	K	M	K	V	D	Q	F	L	T	Q	S	N	I	D	H	T	V	N	S	C	A	V	G	E	Y	K	S	E	L	S	G	.	.	A	D	I	I	I	A	S	T	H	I	A	G	E	I	T	V	T	.	.	.	.	.	G	N	K	Y	V	V	G	V
Query Conservation																																																		.	.																		.	.	.	.	.
Alig confidence												.	.	.	.	.																			.															.	.																		.	.	.	.	.
Template Conservation												.	.	.	.	.																			.
Template Sequence		M	R	V	L	L	I	E	K	N	S	.	.	.	.	.	V	L	G	G	E	I	E	K	G	L	N	V	K	G	F	M	A	D	.	V	T	E	S	L	E	D	G	E	Y	L	M	D	I	R	N	Y	D	L	V	M	V	S	D	K	N	A	L	S	F	V	S	R	I	K	E	K	H	S	S	I	V	V	L	V	S
Template Known Secondary structure									S			.	.	.	.	.											G	G	G	T					.			S	S									T	T	S			S							T	T													T	T	S
Template Predicted Secondary structure												.	.	.	.	.																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	M	L	S	P	A	D	F	G	P	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	N	P	T	S	E	E	E	V	H	A	F	E
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions