Job Description P69822 Confidence 25.21% Date Thu Jan 5 12:12:07 GMT 2012 Rank 183 Aligned Residues 80 % Identity 9% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.
Predicted Secondary structure																																																	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		V	R	I	L	A	V	C	G	N	G	Q	G	S	S	M	I	M	K	M	K	V	D	Q	F	L	T	Q	S	N	I	D	H	T	V	N	S	C	A	V	G	E	Y	K	S	E	L	S	.	.	G	A	D	I	I	I	A	S	T	H	I	A	G	E	I	T	V	T	.	.	.	.	.	.	.	.	.	G	N	K	Y
Query Conservation																																																	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																			.														.	.																			.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																			.
Template Sequence		M	N	V	L	V	I	E	D	D	K	.	.	.	.	.	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	.	S	A	E	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	L	L	P	D	V	N	G	L	E	I	L	K	W	I	K	E	R	S	P	E	T	E
Template Known Secondary structure												.	.	.	.	.														T					.			S	S											S			S						S	B		S	S	S	B													T	T	S
Template Predicted Secondary structure												.	.	.	.	.																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	V	R	N	M	L	S	P	A	D	F	G	P	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	V	I	T	G	H	G	T	I	K	T	A	V	E	A	M
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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