Job Description P69822 Confidence 43.64% Date Thu Jan 5 12:12:07 GMT 2012 Rank 111 Aligned Residues 79 % Identity 14% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70
Predicted Secondary structure																																																		.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.															.	.	.	.	.	.	.	.	.
Query Sequence		T	V	R	I	L	A	V	C	G	N	G	Q	G	S	S	M	I	M	K	M	K	V	D	Q	F	L	T	Q	S	N	I	D	H	T	V	N	S	C	A	V	G	E	Y	K	S	E	L	S	.	.	G	A	D	I	I	I	A	S	T	H	I	A	G	E	.	.	.	.	.	.	.	.	.	I	T	V	T	G	N	K
Query Conservation																																																		.	.															.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																				.														.	.															.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																				.
Template Sequence		N	V	R	V	L	V	V	E	D	E	.	.	.	.	.	R	D	L	A	D	L	I	T	E	A	L	K	K	E	X	F	T	V	D	.	V	C	Y	D	G	E	E	G	X	Y	X	A	L	N	E	P	F	D	V	V	I	L	D	I	X	L	P	V	H	D	G	W	E	I	L	K	S	X	R	E	S	G	V	N	T
Template Known Secondary structure										S	S	.	.	.	.	.														T	T					.			S	S											S			S						S			S	S	S												T	T
Template Predicted Secondary structure												.	.	.	.	.																				.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	V	G	V	R	N	M	L	S	P	A	D	F	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	L	X	L	T	A	L	S	D	V	E	Y	R	V	K
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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