Job Description P76190 Confidence 99.57% Date Thu Jan 5 12:20:17 GMT 2012 Rank 11 Aligned Residues 121 % Identity 22% Template c2p1gA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative xylanase; PDBTitle: crystal structure of a putative xylanase from bacteroides fragilis Resolution 1.80 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200
Predicted Secondary structure																		.	.							.	.	.	.	.	.	.																														.	.	.	.	.	.	.							.	.	.	.	.	.	.
Query SS confidence																		.	.							.	.	.	.	.	.	.																														.	.	.	.	.	.	.							.	.	.	.	.	.	.
Query Sequence		A	M	N	K	L	M	Q	Q	I	G	K	P	Y	R	W	G	.	.	G	S	S	P	R	T	.	.	.	.	.	.	.	G	F	D	C	S	G	L	V	Y	Y	A	Y	K	D	L	V	K	I	R	I	P	R	T	A	N	E	M	Y	H	.	.	.	.	.	.	.	L	R	D	A	A	P	.	.	.	.	.	.	.
Query Conservation																		.	.							.	.	.	.	.	.	.																														.	.	.	.	.	.	.							.	.	.	.	.	.	.
Alig confidence																		.	.							.	.	.	.	.	.	.																.														.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		V	L	S	N	G	L	G	F	V	D	T	P	Y	K	A	G	T	L	E	V	D	D	T	E	D	L	I	I	N	C	D	E	V	D	C	T	T	F	V	E	Y	A	L	A	M	A	.	L	C	P	Q	Q	E	M	Q	E	G	D	F	A	R	N	L	Q	R	I	R	Y	R	D	G	K	I	D	G	Y	T	S	R	L
Template Known Secondary structure								T	T	T	T		B	B		T	T	T	T	S		S	S	S							T	T	S	B														.	T	S	S																		B	G	G	G				S	G	G	G	B
Template Predicted Secondary structure																																																.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
																																																																															201	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Y	I	S	D	W	I	N	N	A	V	R	Q	G	L	L	E	D	V	T	A	A	Y	S	P	F	K	Q	K	L	S	L	S	Y	M	S	T	H	P	E	L	Y	K	S	L	K	N	S	P	E	N	V	A	Q	M	A	K	Y	E	K	A	L	S	G	K	E	V	H	Y	L	P	K	D	K	L	E	P	D	G	L
Template Known Secondary structure			S											T	T	S	S																							G	G	G		T	T	T	T	T																T	T								G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																				.									.	.	.																										.	.
Query SS confidence																				.									.	.	.																										.	.
Query Sequence		S	E	L	K	N	G	D	L	V	F	F	R	T	Q	G	R	G	T	.	A	D	H	V	G	V	Y	V	.	.	.	G	N	G	K	F	I	Q	S	P	R	T	G	Q	E	I	Q	I	T	S	L	S	E	D	Y	W	.	.	Q	R	H	Y	V	G	A	R	R	V	M
Query Conservation																				.									.	.	.																										.	.
Alig confidence																				.									.	.	.																										.	.
Template Conservation
Template Sequence		P	W	I	K	N	G	D	I	I	A	L	T	T	N	T	P	G	L	D	V	S	H	M	G	I	A	I	Y	I	K	G	Q	L	H	L	L	H	A	S	S	K	E	G	K	V	V	V	G	K	T	A	L	S	Q	M	L	K	D	R	K	S	L	T	G	I	R	V	L
Template Known Secondary structure		T	T	S		T	T									S	T	T		S											T	T									T	T	T	T						S	S								T		T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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