 |
Job Description | P76190 | Confidence | 62.72% | Date | Thu Jan 5 12:20:17 GMT 2012 |
Rank | 31 | Aligned Residues | 45 |
% Identity | 27% | Template | c1i7oC_ |
PDB info |
PDB header:isomerase, lyase | Chain: C: PDB Molecule:4-hydroxyphenylacetate degradation bifunctional |
PDBTitle: crystal structure of hpce
|
Resolution | 1.70 Å |
|
 |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | N | G | D | L | V | F | F | R | T | Q | G | R | G | T | A | D | H | V | G | V | Y | V | G | N | G | K | F | I | Q | S | P | R | T | G | Q | E | I | Q | I | T | S | L | S | E | D | Y | W | Q | R | H | Y | V | G | A | R | R | V | M | T | P | K | T | L | R |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
| . | . | . | . | . |
|
|
|   |
|
|
| . |   |
|   |   |
|
|   |
|   |   |
|
|
|
| . | . | . | . |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |
|   |   |   |   |
Template Sequence |   |
L | N | P | G | D | M | I | A | T | . |
. |
. |
. |
. |
G | T | P | K | G | L | S | . |
D | V | V | P | G | D | E | V | V | V | E | V | E | G | . |
. |
. |
. |
V | G | R | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | N | R | I | V | S | E | E | T | A | K |
Template Known Secondary structure |   |
B |
| T | T |
|  |  |  |
| . | . | . | . | . |
|
|
| S |
|
|
| . | B |
|
| T | T |
|  |  |  |  |  |  | T | T | . | . | . | . | T |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
385 | . | . | . | . | 390 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 400 | |
. | . | . | . | . | . | . | . | . | 410 | . | . | . | . | |
|
|
|
. | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | 420 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|