|   |
297 | . | . | 300 | . | . | . | . | . | . | . | . | . | |
310 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
. | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|  |  |  |
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | P | V | S | K | M | T | A | G | V | Y | L | G | . |
A | F | P | R | H | I | P | . |
. |
. |
. |
. |
. |
. |
. |
A | Q | N | A | V | L | D | V | T | F | E | F | P | R | G | R | A | . |
T | K | D | R | L | Y | F | C | V | P | M | L | D | L | V | V | P | E | E | G | E | L | R | Q | A | V | A | M | L | E | T | L | R |
Query Conservation |   |
|   |   |   |
|
|   |
|
|
|
|
|
| . |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
P | N | F | S | W | V | L | P | G | R | L | A | G | L | A | L | P | R | L | P | A | H | Y | Q | F | L | L | D | L | G | V | R | H | L | V | S | L | T | E | R | G | P | P | H | S | D | S | C | P | G | L | T | L | H | R | L | R | I | P | D | F | C | P | P | A | P | D | Q | I | D | R | F | V | Q | I | V | D | E | A | N |
Template Known Secondary structure |   |
T | T |
|  |  |  |  | T | T | T |  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| S | S | S |
|
| T | T | G | G | G |
| T | T | S |  |  |  |  |
|
|
|
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | Q | G | S | V | L | V | H | C | A | L | G | L | S | R | S | A | L | V | V | A | A | W | L | L | C | Y | G | H | C | K | T | V | N | E | A | I | S | Y | I | R | A | R | R | P | Q | I | V | L | T | D | E | H | K | A | M | L | R | L | W | E | N | R |
Query Conservation |   |
  |   |
|   |   |
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |   |   | . |   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
A | R | G | E | A | V | G | V | H | C | A | L | G | F | G | R | T | G | T | X | L | A | C | Y | L | V | K | E | R | G | L | . |
A | A | G | D | A | I | A | E | I | R | R | L | R | P | G | S | I | E | T | Y | E | Q | E | K | A | V | F | Q | F | Y | Q | R |
Template Known Secondary structure |   |
 | T | T |
|  |  |  |  |  |
| S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  | S | T | T |
| S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |