Return to main results Retrieve Phyre Job Id

Job DescriptionP76093
Confidence99.87%DateThu Jan 5 12:18:48 GMT 2012
Rank31Aligned Residues107
% Identity20%Templatec1yn9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:polynucleotide 5'-phosphatase; PDBTitle: crystal structure of baculovirus rna 5'-phosphatase2 complexed with phosphate
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   317..320.........330... ......340.........350.........360........ .370.........380.........390
Predicted Secondary structure 












....











..









Query SS confidence 
















. . . .


































. .





















Query Sequence  AQNAVLDVTFEFPRGRA. . . . TKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREE. . QGSVLVHCALGLSRSALVVAAW
Query Conservation     




  
      ....     
   
  
   
    
  
   
      ..
  




  
 


 


 

Alig confidence 
















....


































..





















Template Conservation   
  




     
        

    
   
   
    
  
   
   
       
 


  
  


 

  
Template Sequence  SIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRY
Template Known Secondary structure  T

S
S
S

TTT




TTS


STTS
SSSS
Template Predicted Secondary structure 



























Template SS confidence 















































































   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   391........400.........410.........420....
Predicted Secondary structure 











Query SS confidence 

































Query Sequence  LLCYGHCKTVNEAISYIRARRPQIVLTDEHKAML
Query Conservation 
       
  

   

  

 
  
      
Alig confidence 






.

























Template Conservation 

     .   


      

  
    
   
Template Sequence  LMHTLGI. APQEAIDRFEKARGHKIERQNYVQDL
Template Known Secondary structure 

.
TS



Template Predicted Secondary structure 


.







Template SS confidence 

































   134.....140 .........150.........160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions