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Job DescriptionP05824
Confidence99.88%DateThu Jan 5 10:58:56 GMT 2012
Rank6Aligned Residues253
% Identity25%Templated1e69a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30.........40.........50. ........60.........70......
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Query Sequence  LAQLTISNFAIVRE. LEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAE. . . . ADMVRTGAARADLCARFSLKDTPAA
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Template Sequence  LKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEKFDMIFAGSENLPPAGSAYVELVFEE. . . . . .
Template Known Secondary structure  SBTTB
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SS

TTT
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   3......10.........20.........30.........40.........50.........60.........70......
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  LRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLL
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Template Sequence  . . . . . . . . . . NGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTGLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ..........SS
TTS
TT
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   87..90.........100.........110.........120.......
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  QEMTARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMAD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  GEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHH
Query Conservation                                          
                                       
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   317..320.........330.........340.........350.........360.........370.........380.........390......
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Query Sequence  VSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQFTID
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VDFYSIVGQGQIDRIVNAYQRVNESFNRFISLLFFGGEGRLEISIR.
Template Known Secondary structure  .................................TT

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   128.130.........140.........150.........160.........170...
 
   397..400.........410.........420.........430.........440.........450.........460.........470......
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Query Sequence  VKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . KPGRRDQKLSLLSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAERFKRL
Template Known Secondary structure  .......................
TTS


BGGGS
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   1065....1070.........1080.........1090.........1100.........1110.........1120.
 
   477..480.........490.........500.........510......
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Query Sequence  LRQLGESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTET
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Template Sequence  LKENSKHTQFIVITHNKIVMEAADLLHGVTMVNGVSAIVP
Template Known Secondary structure  TTTS


TTGGGG
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   1122.......1130.........1140.........1150.........1160.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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