Job Description P05824 Confidence 99.86% Date Thu Jan 5 10:58:56 GMT 2012 Rank 12 Aligned Residues 319 % Identity 14% Template c3qg5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rad50; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		L	A	Q	L	T	I	S	N	F	A	I	V	R	E	L	E	I	D	F	H	S	G	M	T	V	I	T	G	E	T	G	A	G	K	S	I	A	I	D	A	L	G	L	C	L	G	G	R	A	E	.	.	.	.	.	A	D	M	V	R	T	G	A	A	R	A	D	L	C	A	R	F	S	L	K	D	T	P	A	A
Query Conservation																																																				.	.	.	.	.
Alig confidence																																																				.	.	.	.	.
Template Conservation
Template Sequence		P	E	R	L	T	V	R	N	F	L	G	L	K	N	V	D	I	E	F	Q	S	G	I	T	V	V	E	G	P	N	G	A	G	K	S	S	L	F	E	A	I	S	F	A	L	F	G	N	G	I	R	Y	P	N	S	Y	D	Y	V	N	R	N	A	V	D	G	T	A	R	L	V	F	Q	F	E	R	G	G	K	R
Template Known Secondary structure									S	B	T	T		S								S	S							S	T	T	S	S													T	S			S	S		S	S	G	G	G	G	B		S	S	S	S	S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		L	R	W	L	E	E	N	Q	L	E	D	G	H	E	C	L	L	R	R	V	I	S	S	D	G	R	S	R	G	F	I	N	G	T	A	V	P	L	S	Q	.	.	.	.	.	.	.	.	L	R	E	L	G	Q	L	L	I	Q	I	H	G	Q	H	A	H	Q	L	L	T	K	P	E	H	Q	K	F	L	L	D	G
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	I	I	R	E	I	N	A	L	Q	R	K	H	N	A	K	L	S	E	I	L	E	N	G	K	K	A	A	I	A	A	K	P	T	S	V	K	Q	E	V	E	K	I	L	G	I	E	H	R	T	F	I	R	T	V	F	L	P	Q	G	E	I	D	K	L	L	I	S	P	P	S	E	I	T	E	I	I	S	D
Template Known Secondary structure										T	T	T	T											T	T	S					S			S											T	T	T								T	T	T												T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.
Query Sequence		Y	A	N	E	T	S	L	L	Q	E	M	T	A	R	Y	Q	L	W	H	Q	S	C	R	D	L	A	H	H	Q	Q	L	S	Q	E	R	A	A	R	A	E	L	L	Q	Y	Q	L	K	E	L	N	E	F	N	P	Q	P	G	E	F	E	.	.	.	.	.	.	.	.	Q	I	D	E	E	Y	K	R	L	A	N	S
Query Conservation																																																														.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	Q	S	K	E	T	L	E	K	L	E	K	L	L	K	E	K	X	K	K	L	E	N	E	K	K	L	K	E	X	S	D	E	Y	N	N	L	D	L	L	R	K	Y	L	F	D	K	S	N	F	S	R	Y	F	T	G	R	V	L	E	A	V	L	K	R	T	K	A	Y	L	D	I	L	T	N	G	R	F	D
Template Known Secondary structure				S																																													T	T	T																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	L	T	T	S	Q	N	A	L	A	L	M	A	D	G	E	D	A	N	L	Q	S	Q	L	Y	T	A	K	Q	L	V	S	E	L	I	G	M	D	S	K	L	S	G	V	L	D	M	L	E	E	A	T	I	Q	I	A	E	A	S	D	E	L	R	H	Y	C	D	R	L	D	L	D	P	N	R	L	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	F	D	D	E	K	G	G	F	I	I	K	D	W	G	I	E	R	P	A	R	G	L	S	G	G	E	R	A	L	I	S	I	S	L	A	X	S	L	A	E	V	A	S	G	R	L	D	A	F	F	I	D	E	G	F	S	S	L	D	T	E	N	K	E	K	I	A	S	V	L	K	E	L	E	R	L	N	K
Template Known Secondary structure						S	S	S	S	S						T	T					G	G	G	S																									S										G	G	G												G	G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	R	I	S	K	Q	I	S	L	A	R	K	H	H	V	S	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	V	F	I	T	H	D	R	E	F	S	E	A	F	D	R	K	L	R
Template Known Secondary structure									S						T		S	S
Template Predicted Secondary structure
Template SS confidence
		824	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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